RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 TAF2Q6P1X5 1199 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 NFRKBQ6P4R8 1299 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 SLC30A10Q6XR72 485 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 Q6ZRM9 215 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 KIAA0408Q6ZU52 694 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 GALNTL5Q7Z4T8 443 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 HSCBQ8IWL3 235 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 SP8Q8IXZ3 490 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 Q8NA96 180 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 CEP70Q8NHQ1 597 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 DDX17Q92841 729 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 SLC46A1Q96NT5 459 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 YME1L1Q96TA2 773 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ADPGKQ9BRR6 497 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 SIL1Q9H173 461 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 USP40Q9NVE5 1235 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 RPS6KA6Q9UK32 745 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ZFR2Q9UPR6 939 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 MTO1Q9Y2Z2 717 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF711Q9Y462 761 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 CYP46A1Q9Y6A2 500 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 H0Y3Z8 333 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 RAB27BO00194 218 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 KCNQ3O43525 872 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 IGHDP01880 384 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 PRKCBP05771 671 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 C8AP07357 584 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 ELANEP08246 267 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 NPPBP16860 134 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 VIPR2P41587 438 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 AP2B1P63010 937 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 NHLH2Q02577 135 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 SLC44A4Q53GD3 710 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 PLA1AQ53H76 456 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 DNAJC21Q5F1R6 531 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 METTL24Q5JXM2 366 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 RAP1GAP2Q684P5 730 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 TAPT1Q6NXT6 567 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 SLC22A25Q6T423 547 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 MFSD6Q6ZSS7 791 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 TMTC3Q6ZXV5 915 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 TMPRSS9Q7Z410 1059 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 GAS2L3Q86XJ1 694 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 GATAD2AQ86YP4 633 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 SLC44A2Q8IWA5 706 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 AOPEPQ8N6M6 819 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 PSD4Q8NDX1 1056 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF384Q8TF68 577 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 RNF125Q96EQ8 232 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 SNX27Q96L92 541 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 TWSG1Q9GZX9 223 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 ACAD9Q9H845 621 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 DBNDD1Q9H9R9 158 aa6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 ZHX1Q9UKY1 873 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-202ENST00000517533 SOS1Q07889 1333 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 AP3D1O14617 1153 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 DNPH1O43598 174 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 IL11P20809 199 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 ACVR2AP27037 513 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 PIK3CAP42336 1068 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 MMP14P50281 582 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 RNASE9P60153 205 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 GALNT2Q10471 571 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 KCNAB1Q14722 419 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 RASA2Q15283 850 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 ASIC2Q16515 512 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 CTXN3Q4LDR2 81 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF449Q6P9G9 518 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 CRTC1Q6UUV9 634 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 HTR3DQ70Z44 454 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 RTL10Q7L3V2 364 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 KRT74Q7RTS7 529 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 KRT28Q7Z3Y7 464 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 KDELC2Q7Z4H8 507 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 DNAJB7Q7Z6W7 309 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 CARNMT1Q8N4J0 409 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF808Q8N4W9 903 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 CCDC150Q8NCX0 1101 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 APPL2Q8NEU8 664 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 TBC1D22AQ8WUA7 517 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 TRAPPC9Q96Q05 1148 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 MPHOSPH9Q99550 1183 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 RTKNQ9BST9 563 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 USP44Q9H0E7 712 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 PCDHAC1Q9H158 963 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 XYLT2Q9H1B5 865 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 ABHD16BQ9H3Z7 469 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 TMOD4Q9NZQ9 345 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 ZMYND8Q9ULU4 1186 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 CAPN11Q9UMQ6 739 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 TBX20Q9UMR3 447 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms