RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 GTPBP10A4D1E9 387 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 NPIPB15A6NHN6 443 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PRR19A6NJB7 356 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 KIF28PB7ZC32 967 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 E9PLN8 166 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PEX12O00623 359 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SH2B2O14492 632 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TSPAN4O14817 238 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 DCLK1O15075 740 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 FYB1O15117 783 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TBCAO75347 108 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TULP3O75386 442 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TOX4O94842 621 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 AGFG2O95081 481 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 RASAL1O95294 804 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 LARGE1O95461 756 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CER1O95813 267 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 LMNAP02545 664 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 AMHP03971 560 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 HMGCRP04035 888 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SPINK2P20155 84 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 NFKBIAP25963 317 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 HOXA10P31260 410 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 ABCD1P33897 745 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 GDNFP39905 211 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 DPP6P42658 865 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 GZMKP49863 264 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 RARSP54136 660 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PPARDQ03181 441 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 KRT17Q04695 432 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TOP3AQ13472 1001 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 BOP1Q14137 746 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CSHL1Q14406 222 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PUM1Q14671 1186 aaKnown RBP eCLIP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PCOLCEQ15113 449 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TMEM266Q2M3C6 531 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 C1orf141Q5JVX7 400 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 LIPMQ5VYY2 423 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TRIM68Q6AZZ1 485 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 MCTP2Q6DN12 878 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PLBD1Q6P4A8 553 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 IL27RAQ6UWB1 636 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SYNE3Q6ZMZ3 975 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 LARP4Q71RC2 724 aaKnown RBP eCLIP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PPP1R32Q7Z5V6 425 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SPRED2Q7Z698 418 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 ZNF280BQ86YH2 543 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 WFDC3Q8IUB2 231 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 RHOT2Q8IXI1 618 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 C17orf53Q8N3J3 647 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CARNMT1Q8N4J0 409 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 LSM14AQ8ND56 463 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 OR5M3Q8NGP4 307 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC35B2Q8TB61 432 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 ZCCHC10Q8TBK6 192 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 MYLIPQ8WY64 445 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 GCDHQ92947 438 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SNX21Q969T3 373 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 RBM17Q96I25 401 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 KLHL32Q96NJ5 620 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CLIC6Q96NY7 704 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 NR1H4Q96RI1 486 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 WRNIP1Q96S55 665 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 EYA3Q99504 573 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 NCAPGQ9BPX3 1015 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 VKORC1Q9BQB6 163 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 NUDT22Q9BRQ3 303 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 EDEM3Q9BZQ6 932 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TTYH3Q9C0H2 523 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 ENKD1Q9H0I2 346 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 TAOK3Q9H2K8 898 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 GSTO2Q9H4Y5 243 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 VEZTQ9HBM0 779 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PDE7BQ9NP56 450 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 SEL1LQ9UBV2 794 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CHORDC1Q9UHD1 332 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 VPS51Q9UID3 782 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CROTQ9UKG9 612 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CORO1CQ9ULV4 474 aaPredicted RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 ANGEL1Q9UNK9 670 aaKnown RBP2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 GDAQ9Y2T3 454 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 CDY1Q9Y6F8 540 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 BTBD11A6QL63 1104 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 C19orf81C9J6K1 198 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 NRP1O14786 923 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 CD3EAPO15446 510 aaKnown RBP2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 SEPT4O43236 478 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC7A4O43246 635 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 RGS10O43665 173 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 SRGAP2O75044 1071 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 GUCY1B2O75343 617 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 VPS4BO75351 444 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 SASH1O94885 1247 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 CCNDBP1O95273 360 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 TGDSO95455 350 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 POMCP01189 267 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 CHGBP05060 677 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 JUNP05412 331 aaKnown RBP2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 SPARCP09486 303 aa2.79□□□□□ -1.96
SCARNA3-201ENST00000517097 SNRPA1P09661 255 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms