RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 CFHR1Q03591 330 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MCL1Q07820 350 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 GPR162Q16538 588 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CC2D1BQ5T0F9 858 aaKnown RBP3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TMTC4Q5T4D3 741 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RUSC1-AS1Q66K80 236 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 NPNTQ6UXI9 565 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RANBP10Q6VN20 620 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MAEAQ7L5Y9 396 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZBTB34Q8NCN2 500 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 IL31RAQ8NI17 732 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MPLKIPQ8TAP9 179 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 WASF1Q92558 559 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MAML1Q92585 1016 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CTHRC1Q96CG8 243 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 HIC2Q96JB3 615 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LRGUKQ96M69 825 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DHX36Q9H2U1 1008 aaKnown RBP3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 FOXP1Q9H334 677 aaPredicted RBP3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 POT1Q9NUX5 634 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CNTNAP2Q9UHC6 1331 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 hCG_2014768A0A024R1R8 64 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TRIM43BA6NCK2 446 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 A8MVJ9 347 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ISM1B1AKI9 464 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PYCARD-AS1I3L0S3 204 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TBX3O15119 743 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 FRS3O43559 492 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 AKAP10O43572 662 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SPRY2O43597 315 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RRP9O43818 475 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TLR2O60603 784 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RASSF9O75901 435 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 INMTO95050 263 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 HOXD9P28356 352 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PGDP52209 483 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 EPHB1P54762 984 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LINC00205P59089 165 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CFHR3Q02985 330 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ARHGEF7Q14155 803 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ST3GAL2Q16842 350 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TRIM71Q2Q1W2 868 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SLC9C1Q4G0N8 1177 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MIDNQ504T8 468 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 UBE2Q1Q7Z7E8 422 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PIM3Q86V86 326 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CHPFQ8IZ52 775 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ARFGAP1Q8N6T3 406 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 OR56A3Q8NH54 315 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TRIM43Q96BQ3 446 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 NMD3Q96D46 503 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MARK4Q96L34 752 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TRMOQ9BU70 441 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RTFDC1Q9BY42 306 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 B3GNT5Q9BYG0 378 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CDH19Q9H159 772 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TMEM60Q9H2L4 133 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ATP6V0A4Q9HBG4 840 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DDX56Q9NY93 547 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 WWOXQ9NZC7 414 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LPAR3Q9UBY5 353 aa3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 NKX1-2Q9UD57 310 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RGS17Q9UGC6 210 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 AFF4Q9UHB7 1163 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CD8B2A6NJW9 211 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 AQP7P3A6NL99 342 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 EXOC5O00471 708 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CTNND1O60716 968 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TULP3O75386 442 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PIAS2O75928 621 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PDGFRBP09619 1106 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CTSAP10619 480 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 BRAFP15056 766 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TACR3P29371 465 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ME1P48163 572 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PTDSS1P48651 473 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 GATMP50440 423 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TXNL4AP83876 142 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MFSD13AQ14CX5 517 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 AWAT1Q58HT5 328 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CXorf57Q6NSI4 855 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 KIAA1161Q6NSJ0 714 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MZT2AQ6P582 158 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LVRNQ6Q4G3 990 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZDHHC24Q6UX98 284 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 C9orf47Q6ZRZ4 202 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 EPM2AIP1Q7L775 607 aaPredicted RBP3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 OVCH2Q7RTZ1 564 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PIP4P1Q86T03 277 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MICU3Q86XE3 530 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TPH2Q8IWU9 490 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 C12orf76Q8N812 135 aaPredicted RBP3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PNPLA1Q8N8W4 532 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 WDYHV1Q96HA8 205 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 GPATCH3Q96I76 525 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 VPS50Q96JG6 964 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZFYVE19Q96K21 471 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LYZL4Q96KX0 146 aa3.11□□□□□ -1.91
SCARNA16.2-201ENST00000516520 STK31Q9BXU1 1019 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms