RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 E5RJQ4 531 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 AP5Z1O43299 807 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 TLR5O60602 858 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 GABBR2O75899 941 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 RALAP11233 206 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 CHRNB2P17787 502 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 FCARP24071 287 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 PRKCIP41743 596 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 ZNF75DP51815 510 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 DAOAP59103 153 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNF8-215ENST00000515572 NOMO3P69849 1222 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 SLC7A9P82251 487 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 FMO1Q01740 532 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 KLHDC10Q6PID8 442 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 POTEHQ6S545 545 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 PARM1Q6UWI2 310 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 ZDHHC17Q8IUH5 632 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 ARID3BQ8IVW6 561 aaPredicted RBP12.5□□□□□ -0.41
SNF8-215ENST00000515572 CELF5Q8N6W0 485 aaKnown RBP12.5□□□□□ -0.41
SNF8-215ENST00000515572 ARL14EPQ8N8R7 260 aaPredicted RBP12.5□□□□□ -0.41
SNF8-215ENST00000515572 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
SNF8-215ENST00000515572 CPLX3Q8WVH0 158 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 FGF14Q92915 247 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 NECAB3Q96P71 396 aaPredicted RBP12.5□□□□□ -0.41
SNF8-215ENST00000515572 AGPAT1Q99943 283 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 NACA2Q9H009 215 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 ARHGAP26Q9UNA1 814 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 BZW2Q9Y6E2 419 aaKnown RBP12.5□□□□□ -0.41
SNF8-215ENST00000515572 NUMBLQ9Y6R0 609 aa12.5□□□□□ -0.41
SNF8-215ENST00000515572 KIF26AQ9ULI4 1882 aaPredicted RBP12.49□□□□□ -0.41
SNF8-215ENST00000515572 DPYSL4O14531 572 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 COCHO43405 550 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 CYP1A1P04798 512 aaPredicted RBP12.49□□□□□ -0.41
SNF8-215ENST00000515572 SERPING1P05155 500 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 RARGP13631 454 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 TCF3P15923 654 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 CASP14P31944 242 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 ATP5C1P36542 298 aaKnown RBP12.49□□□□□ -0.41
SNF8-215ENST00000515572 TDGQ13569 410 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 PTPN20Q4JDL3 420 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 NAA35Q5VZE5 725 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 BTBD8Q5XKL5 378 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 PPP1R2P3Q6NXS1 205 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 BEND5Q7L4P6 421 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 BHLHA9Q7RTU4 235 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNF8-215ENST00000515572 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 SLC44A3Q8N4M1 653 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 KIAA1958Q8N8K9 716 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 DEPDC1BQ8WUY9 529 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 CYP2S1Q96SQ9 504 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 CD320Q9NPF0 282 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 ABCC13Q9NSE7 274 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
SNF8-215ENST00000515572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNF8-215ENST00000515572 SORCS3Q9UPU3 1222 aa12.49□□□□□ -0.41
SNF8-215ENST00000515572 YJEFN3A6XGL0 299 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 E7ENQ6 273 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 PIK3R2O00459 728 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 PAPSS1O43252 624 aaPredicted RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 LTFP02788 710 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 GLI1P08151 1106 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 UNGP13051 313 aaPredicted RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 PSMC3P17980 439 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 VIPR2P41587 438 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 NSFP46459 744 aaKnown RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 PGFP49763 221 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 CENPCQ03188 943 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 ARID5BQ14865 1188 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 EFHC1Q5JVL4 640 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 E4F1Q66K89 784 aaPredicted RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 TOGARAM2Q6ZUX3 1019 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 RSRC2Q7L4I2 434 aaKnown RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 DRC7Q8IY82 874 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms