RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ADRM1Q16186 407 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 C21orf62-AS1Q17RA5 79 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 TMC7Q7Z402 723 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 ANKS4BQ8N8V4 417 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 RDH13Q8NBN7 331 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 HCAR2Q8TDS4 363 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM136AQ96C01 138 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 PBKQ96KB5 322 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC43Q96MW1 224 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 PXMP2Q9NR77 195 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 EDARQ9UNE0 448 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 COG5Q9UP83 839 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 NOC2LQ9Y3T9 749 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 GPSM3Q9Y4H4 160 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 RIPK3Q9Y572 518 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 NFKBIEO00221 500 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 YKT6O15498 198 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 CNOT3O75175 753 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 OLFM2O95897 454 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 ADRB2P07550 413 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 PABPC1P11940 636 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 GNAZP19086 355 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 MSH2P43246 934 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 RTP1P59025 263 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 ERVK-9P63128 1117 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 COG7P83436 770 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 SMARCB1Q12824 385 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 MTMR2Q13614 643 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 SYCP2LQ5T4T6 812 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 CIAPIN1Q6FI81 312 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 Q6ZNX1 250 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC25Q86WR0 208 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 C4orf19Q8IY42 314 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 MREGQ8N565 214 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC197Q8NCU1 140 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 REPS2Q8NFH8 660 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC35G2Q8TBE7 412 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 GAB3Q8WWW8 586 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 ATL1Q8WXF7 558 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 ZIM3Q96PE6 472 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 PDCD2LQ9BRP1 358 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 PPCSQ9HAB8 311 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 MRPL40Q9NQ50 206 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 TRIM33Q9UPN9 1127 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 NUMBLQ9Y6R0 609 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 NVLO15381 856 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 EIF2S1P05198 315 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 UBTFL6P0CB48 400 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ADSSP30520 456 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ADSLP30566 484 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PTGS2P35354 604 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 MTHFRP42898 656 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 EMP3P54852 163 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 TMPRSS15P98073 1019 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ANO4Q32M45 955 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PLA2G4FQ68DD2 849 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX42Q86XP3 938 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 IFT20Q8IY31 132 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 IQCKQ8N0W5 287 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC20A1Q8WUM9 679 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 STON2Q8WXE9 905 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 INTS12Q96CB8 462 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 MOGAT1Q96PD6 335 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 GPATCH1Q9BRR8 931 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 HSPBP1Q9NZL4 362 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 POLR2AP24928 1970 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PFASO15067 1338 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 CTNND1O60716 968 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 STBD1O95210 358 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 FKBP9O95302 570 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ZBTB11O95625 1053 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ITGA4P13612 1032 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 VAMP7P51809 220 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PPP2R2BQ00005 443 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 RUNX1T1Q06455 604 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ALCAMQ13740 583 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ARHGAP44Q17R89 818 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 CLVS2Q5SYC1 327 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 HAUS6Q7Z4H7 955 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 SPATA2LQ8IUW3 424 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 RNF169Q8NCN4 708 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PIP4K2CQ8TBX8 421 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 GIPC3Q8TF64 312 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 RFFLQ8WZ73 363 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 KAT5Q92993 513 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 KLHL29Q96CT2 875 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 AP1M1Q9BXS5 423 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 THAP2Q9H0W7 228 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 NEUROG2Q9H2A3 272 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 NTN4Q9HB63 628 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 CHST12Q9NRB3 414 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 TBC1D22BQ9NU19 505 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 GGA3Q9NZ52 723 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PTTG2Q9NZH5 202 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 DICER1Q9UPY3 1922 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 H7C0C1 242 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms