RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 TMEM171Q8WVE6 324 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 SNRNP27Q8WVK2 155 aaKnown RBP5.85□□□□□ -1.47
RFC1-216ENST00000514572 WDR60Q8WVS4 1066 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 ST8SIA4Q92187 359 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 GNRHR2Q96P88 292 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 HIST1H2AAQ96QV6 131 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 SERINC2Q96SA4 455 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 REEP2Q9BRK0 252 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 UNKLQ9H9P5 680 aaKnown RBP5.85□□□□□ -1.47
RFC1-216ENST00000514572 CLIC5Q9NZA1 410 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 KCNE5Q9UJ90 142 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 NFU1Q9UMS0 254 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 DNAJC16Q9Y2G8 782 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 DERAQ9Y315 318 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 SNX14Q9Y5W7 946 aa5.85□□□□□ -1.47
RFC1-216ENST00000514572 WDR62O43379 1518 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 ZAR1LA6NP61 321 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 ZSCAN9O15535 394 aaPredicted RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 SERPINA4P29622 427 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 APOBEC3AP31941 199 aaPredicted RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 MAGEA10P43363 369 aaPredicted RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.84□□□□□ -1.47
RFC1-216ENST00000514572 MTAPQ13126 283 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 E2F2Q14209 437 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 RBM20Q5T481 1227 aaKnown RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 SLC9C2Q5TAH2 1124 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 NT5DC1Q5TFE4 455 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 SPATA1Q5VX52 437 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 B3GNTL1Q67FW5 361 aaPredicted RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 RINLQ6ZS11 566 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 CLNKQ7Z7G1 428 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 SLC15A3Q8IY34 581 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 ABRAQ8N0Z2 381 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 ANKRD35Q8N283 1001 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 D2HGDHQ8N465 521 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 CPT1BQ92523 772 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 C3orf49Q96BT1 292 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 C7orf26Q96N11 449 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 PRDM13Q9H4Q3 707 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 PREBQ9HCU5 417 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 PPP4R1LQ9P1A2 415 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 KCND3Q9UK17 655 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 SLC27A6Q9Y2P4 619 aa5.84□□□□□ -1.47
RFC1-216ENST00000514572 USP15Q9Y4E8 981 aaPredicted RBP5.84□□□□□ -1.47
RFC1-216ENST00000514572 LOC105369274A0A096LPK9 316 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 LOC102723532A0A0G2JNH3 316 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 DYTNA2CJ06 578 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 SLC38A8A6NNN8 435 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 KIF28PB7ZC32 967 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 TOR1BO14657 336 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 TMEM63AO94886 807 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 FARP2O94887 1054 aaPredicted RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 CER1O95813 267 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 LMNAP02545 664 aaKnown RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 HNRNPA1P09651 372 aaKnown RBP eCLIP5.83□□□□□ -1.48
RFC1-216ENST00000514572 ADORA2AP29274 412 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 NPTX2P47972 431 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 KCNC1P48547 511 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 GATMP50440 423 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 PDE6CP51160 858 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 PRKG2Q13237 762 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 CSHL1Q14406 222 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 NFIXQ14938 502 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 PDCD4Q53EL6 469 aaKnown RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 TCERG1LQ5VWI1 586 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 ICE2Q659A1 982 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 ATG16L1Q676U5 607 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 C4orf50Q6ZRC1 276 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 PIK3AP1Q6ZUJ8 805 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 MICALCLQ6ZW33 695 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 RASGRP2Q7LDG7 609 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 MAPKAPK5Q8IW41 473 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 OR4N4Q8N0Y3 316 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 HVCN1Q96D96 273 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 KTI12Q96EK9 354 aaPredicted RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 MCRS1Q96EZ8 462 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 ZBTB45Q96K62 511 aaPredicted RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 MNTQ99583 582 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 TREX2Q9BQ50 279 aaPredicted RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 CHCHD6Q9BRQ6 235 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 MECRQ9BV79 373 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 VN1R3Q9BXE9 311 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 PAIP1Q9H074 479 aaKnown RBP5.83□□□□□ -1.48
RFC1-216ENST00000514572 NOD2Q9HC29 1040 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 KCNK9Q9NPC2 374 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 RXFP3Q9NSD7 469 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 ZBTB1Q9Y2K1 713 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 AFG3L2Q9Y4W6 797 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 ADAMTS20P59510 1910 aa5.83□□□□□ -1.48
RFC1-216ENST00000514572 VWA3AA6NCI4 1184 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 K7ENM7 598 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 FOXS1O43638 330 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 LARGE1O95461 756 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 GPANK1O95872 356 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 CFIP05156 583 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 HLA-DOAP06340 250 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 ZSCAN22P10073 491 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms