RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 HOMER3Q9NSC5 361 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 TMEM39AQ9NV64 488 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.44□□□□□ -0.26
PVT1-203ENST00000513868 ADAM28Q9UKQ2 775 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 NEU2Q9Y3R4 380 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 KIAA1671Q9BY89 1806 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 SYN3O14994 580 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 HOXA2O43364 376 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 PRPSAP2O60256 369 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 DAB1O75553 588 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 ALDH2P05091 517 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 CLTBP09497 229 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 ITGB8P26012 769 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 ATXN1P54253 815 aaKnown RBP13.43□□□□□ -0.26
PVT1-203ENST00000513868 TSPY1Q01534 308 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
PVT1-203ENST00000513868 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
PVT1-203ENST00000513868 SND1Q7KZF4 910 aaKnown RBP eCLIP13.43□□□□□ -0.26
PVT1-203ENST00000513868 SIX6OS1Q8N1H7 587 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 KCTD6Q8NC69 237 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 TEKT4Q8WW24 435 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■■■■■ 50.8
PVT1-203ENST00000513868 HSPH1Q92598 858 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 TBCBQ99426 244 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 NPY6RQ99463 290 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 ZCWPW1Q9H0M4 648 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 DPH5Q9H2P9 285 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 C11orf49Q9H6J7 331 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 CNGB3Q9NQW8 809 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 FAM114A2Q9NRY5 505 aa13.43□□□□□ -0.26
PVT1-203ENST00000513868 YJEFN3A6XGL0 299 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 TBKBP1A7MCY6 615 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 E7ENQ6 273 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 TRAPPC3O43617 180 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 LIASO43766 372 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 FBXO21O94952 628 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 ECEL1O95672 775 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 GALTP07902 379 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 OR4Q2P0C623 313 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 FGFR3P22607 806 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 IL4RP24394 825 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 LBX1P52954 281 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 BCAR1P56945 870 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 NNTQ13423 1086 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 DPYSL3Q14195 570 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 PKN2Q16513 984 aaKnown RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 CA9Q16790 459 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 SLC25A52Q3SY17 297 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 BOLA3Q53S33 107 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 ODF2Q5BJF6 829 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 ZC3H12AQ5D1E8 599 aaKnown RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 SYPL2Q5VXT5 272 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 PM20D1Q6GTS8 502 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 CNKSR3Q6P9H4 555 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 DRICH1Q6PGQ1 229 aaPredicted RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 BBS12Q6ZW61 710 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 STRADAQ7RTN6 431 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 TMEM173Q86WV6 379 aaPredicted RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 ATL2Q8NHH9 583 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 FAM71BQ8TC56 605 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 NCAPGQ9BPX3 1015 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 TMEM175Q9BSA9 504 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 SNRNP25Q9BV90 132 aaKnown RBP13.42□□□□□ -0.26
PVT1-203ENST00000513868 TRIM31Q9BZY9 425 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 ZDHHC18Q9NUE0 388 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■□□ 18.2
PVT1-203ENST00000513868 GRHL1Q9NZI5 618 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
PVT1-203ENST00000513868 MDM4O15151 490 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 TP73O15350 636 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 USP17L7P0C7H9 530 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 NOS2P35228 1153 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
PVT1-203ENST00000513868 CDH6P55285 790 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 IKBKEQ14164 716 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 FAM171A1Q5VUB5 890 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 ZDHHC24Q6UX98 284 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
PVT1-203ENST00000513868 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
PVT1-203ENST00000513868 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 POPDC2Q9HBU9 364 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 DMAP1Q9NPF5 467 aaPredicted RBP13.41□□□□□ -0.26
PVT1-203ENST00000513868 GPATCH2LQ9NWQ4 482 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 RASAL2Q9UJF2 1139 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 DNPEPQ9ULA0 475 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 USP3Q9Y6I4 520 aa13.41□□□□□ -0.26
PVT1-203ENST00000513868 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 CST8O60676 142 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 DGKIO75912 1065 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms