RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 AVENQ9NQS1 362 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SMPD4Q9NXE4 827 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 TAS2R14Q9NYV8 317 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 TRPM5Q9NZQ8 1165 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 UXTQ9UBK9 157 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 NAGPAQ9UK23 515 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 MYO6Q9UM54 1294 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SCML2Q9UQR0 700 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 FAM50BQ9Y247 325 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 CEP83Q9Y592 693 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■■■□□ 15.2
TOPBP1-209ENST00000513818 FAM92AA1XBS5 289 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 GOLGA6L3A6NEY3 463 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 YJEFN3A6XGL0 299 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 E7ENQ6 273 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 PAPSS1O43252 624 aaPredicted RBP10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC34A2O95436 690 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 GJB6O95452 261 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 CKMP06732 381 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 FCARP24071 287 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 VIPR2P41587 438 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 DAOAP59103 153 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 KLHL30Q0D2K2 578 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 TBX2Q13207 712 aaPredicted RBP10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 TRIM14Q14142 442 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 TAF5Q15542 800 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 ARHGAP15Q53QZ3 475 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 FAM78AQ5JUQ0 283 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 HGSNATQ68CP4 663 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 PARM1Q6UWI2 310 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 MMS22LQ6ZRQ5 1243 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 FAM183BPQ6ZVS7 135 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 OTOP3Q7RTS5 596 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 ADHFE1Q8IWW8 467 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 ARL14EPQ8N8R7 260 aaPredicted RBP10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 TMEM35BQ8NCS4 154 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 ZNF397Q8NF99 534 aaPredicted RBP10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 RIN3Q8TB24 985 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 KCTD13Q8WZ19 329 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 EDEM1Q92611 657 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 FGF14Q92915 247 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 PPP1R13BQ96KQ4 1090 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 CYP2S1Q96SQ9 504 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 C11orf70Q9BRQ4 267 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 RPP25Q9BUL9 199 aaKnown RBP10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC46A2Q9BY10 475 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 EDEM3Q9BZQ6 932 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 FBXO44Q9H4M3 255 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 SYNCQ9H7C4 482 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 CD320Q9NPF0 282 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 ABHD10Q9NUJ1 306 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 IL37Q9NZH6 218 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 AIPL1Q9NZN9 384 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 CCL26Q9Y258 94 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 USP3Q9Y6I4 520 aa10.3□□□□□ -0.76
TOPBP1-209ENST00000513818 LOC730098B7Z3J9 87 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 GOLGA8SH3BPF8 625 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 DDX3XO00571 662 aaKnown RBP eCLIP10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 COCHO43405 550 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 TLR5O60602 858 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 GRAP2O75791 330 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 TBX18O95935 607 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ZBED1O96006 694 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 CYP1A1P04798 512 aaPredicted RBP10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ZDHHC11BP0C7U3 371 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 IRF1P10914 325 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 LAMP2P13473 410 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 CDH5P33151 784 aaPredicted RBP10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 PRKCIP41743 596 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 YWHAGP61981 247 aaKnown RBP eCLIP10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ARID5BQ14865 1188 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 MEA1Q16626 185 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 CLEC16AQ2KHT3 1053 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 TANGO2Q6ICL3 276 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 OR6B2Q6IFH4 312 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 CCDC186Q7Z3E2 898 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 DRC7Q8IY82 874 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 PDZD8Q8NEN9 1154 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 IPO4Q8TEX9 1081 aaKnown RBP10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 FAM149B1Q96BN6 582 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 HSFY1Q96LI6 401 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 CEP295NLQ96MC4 621 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ASB16Q96NS5 453 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 UBXN6Q9BZV1 441 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 RNF38Q9H0F5 515 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 LHX5Q9H2C1 402 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 TASP1Q9H6P5 420 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 EHD2Q9NZN4 543 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 ARHGAP20Q9P2F6 1191 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 RASAL2Q9UJF2 1139 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 NR2E1Q9Y466 385 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms