RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 LRRC3Q9BY71 257 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 NFKBIZQ9BYH8 718 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 ASAH2Q9NR71 780 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 C2orf42Q9NWW7 574 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 FBXL5Q9UKA1 691 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 BACE2Q9Y5Z0 518 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 ZMYM2Q9UBW7 1377 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CHD8Q9HCK8 2581 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 SMIM28A0A1B0GU29 152 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 ARHGEF37A1IGU5 675 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 BTBD18B2RXH4 712 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 H7C4K7 107 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 TMEM189-UBE2V1I3L0A0 370 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 K7ERI5 159 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 ACKR2O00590 384 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 LRP3O75074 770 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 SOAT2O75908 522 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 HTR3BO95264 441 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 POU2F2P09086 479 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 OR4Q2P0C623 313 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CCDC192P0DO97 292 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 ATF2P15336 505 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 ITIH2P19823 946 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 MARCKSP29966 332 aaPredicted RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 GUCY1B3Q02153 619 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 SPAG1Q07617 926 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 TRIM29Q14134 588 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 PPP2R5AQ15172 486 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 FAM187BQ17R55 369 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 STXBP5Q5T5C0 1151 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CDCA2Q69YH5 1023 aaPredicted RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 SLC8B1Q6J4K2 584 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CD300LGQ6UXG3 332 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 FAM214BQ7L5A3 538 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 APBB1IPQ7Z5R6 666 aaPredicted RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 LONP2Q86WA8 852 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CATSPER3Q86XQ3 398 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 PLD6Q8N2A8 252 aaKnown RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 SPEM1Q8N4L4 309 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 NECAB1Q8N987 351 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 DEPDC1BQ8WUY9 529 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 WASF1Q92558 559 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 RSPRY1Q96DX4 576 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CCDC113Q9H0I3 377 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CDT1Q9H211 546 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 TMEM60Q9H2L4 133 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 TOPORSQ9NS56 1045 aaPredicted RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 CEP72Q9P209 647 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 KLHL3Q9UH77 587 aa6.31□□□□□ -1.4
GYPB-215ENST00000513677 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 TIMM13Q9Y5L4 95 aaPredicted RBP6.31□□□□□ -1.4
GYPB-215ENST00000513677 STK36Q9NRP7 1315 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 UPK3BL1B0FP48 263 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 UPK3BL2E5RIL1 263 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 SPECC1L-ADORA2AF8WAN1 911 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 K7ESF4 209 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 EXTL3O43909 919 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 MOSPD3O75425 235 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 ABLIM3O94929 683 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 CTDNEP1O95476 244 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 CEACAM5P06731 702 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 CYP11B2P19099 503 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 MATR3P43243 847 aaKnown RBP eCLIP6.3□□□□□ -1.4
GYPB-215ENST00000513677 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 OXCT1P55809 520 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 PEX3P56589 373 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 RACK1P63244 317 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 TNK2Q07912 1038 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 ZNF174Q15697 407 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 TMEM201Q5SNT2 666 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 GPR158Q5T848 1215 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 KBTBD6Q86V97 674 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 MFSD6LQ8IWD5 586 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 DIS3L2Q8IYB7 885 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 TCEAL8Q8IYN2 117 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 FAM177A1Q8N128 213 aaPredicted RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 ERMNQ8TAM6 284 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 DDX1Q92499 740 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 ZMAT2Q96NC0 199 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 TARS2Q9BW92 718 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 NT5C1AQ9BXI3 368 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 TUFT1Q9NNX1 390 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 SLC38A7Q9NVC3 462 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 GTSE1Q9NYZ3 720 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 TUBGCP4Q9UGJ1 667 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms