RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 AIFM3Q96NN9 605 aa10.24□□□□□ -0.77
PTPN20-228ENST00000513266 C6orf106Q9H6K1 298 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-228ENST00000513266 PLEKHA5Q9HAU0 1116 aa10.24□□□□□ -0.77
PTPN20-228ENST00000513266 LRRC4CQ9HCJ2 640 aa10.24□□□□□ -0.77
PTPN20-228ENST00000513266 DSEQ9UL01 958 aa10.24□□□□□ -0.77
PTPN20-228ENST00000513266 CPQQ9Y646 472 aa10.24□□□□□ -0.77
PTPN20-228ENST00000513266 TDRD6O60522 2096 aaKnown RBP10.24□□□□□ -0.77
PTPN20-228ENST00000513266 LACTBL1A8MY62 500 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 CYB561D2O14569 222 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 DFNA5O60443 496 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 MED24O75448 989 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 OLFM2O95897 454 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 MT-CO3P00414 261 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 IGHDP01880 384 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 PFKLP17858 780 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 OXTRP30559 389 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 LSSP48449 732 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 FOXK1P85037 733 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 NOLC1Q14978 699 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPN20-228ENST00000513266 IGFBP7Q16270 282 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 CCDC142Q17RM4 750 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 ARL13BQ3SXY8 428 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 SPATA1Q5VX52 437 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 XKR5Q6UX68 686 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 METTL23Q86XA0 190 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 CATSPER3Q86XQ3 398 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 LSMEM2Q8N112 164 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 DRC1Q96MC2 740 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 NUP58Q9BVL2 599 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 HAPLN2Q9GZV7 340 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 TMEM134Q9H6X4 195 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 RPF1Q9H9Y2 349 aaKnown RBP10.23□□□□□ -0.77
PTPN20-228ENST00000513266 NCOA5Q9HCD5 579 aaKnown RBP10.23□□□□□ -0.77
PTPN20-228ENST00000513266 ARHGAP28Q9P2N2 729 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 PLEKHB1Q9UF11 243 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-228ENST00000513266 ADAMTS1Q9UHI8 967 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-228ENST00000513266 PCDHB6Q9Y5E3 794 aa10.23□□□□□ -0.77
PTPN20-228ENST00000513266 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-228ENST00000513266 ZFHX3Q15911 3703 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 ARHGEF35A5YM69 484 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 CCDC169A6NNP5 214 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 GFRA2O00451 464 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 PIRO00625 290 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 EFSO43281 561 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 ITGAVP06756 1048 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 FAM87AP0C7U9 286 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 NPTX2P47972 431 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 ORC1Q13415 861 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 NFE2Q16621 373 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-228ENST00000513266 EARS2Q5JPH6 523 aaKnown RBP10.22□□□□□ -0.77
PTPN20-228ENST00000513266 BTBD8Q5XKL5 378 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 GRAMD4Q6IC98 578 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 FAM124AQ86V42 546 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 TMEM25Q86YD3 366 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 TMPRSS6Q8IU80 811 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 RASEFQ8IZ41 740 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 LEO1Q8WVC0 666 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-228ENST00000513266 KIFAP3Q92845 792 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 EXTL1Q92935 676 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 MMS19Q96T76 1030 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 SEMA3CQ99985 751 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 PYM1Q9BRP8 204 aaKnown RBP10.22□□□□□ -0.77
PTPN20-228ENST00000513266 ORAI3Q9BRQ5 295 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 EPN3Q9H201 632 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 POLR1BQ9H9Y6 1135 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 ABCB6Q9NP58 842 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 TBC1D14Q9P2M4 693 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
PTPN20-228ENST00000513266 OTOGQ6ZRI0 2925 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 XPOTO43592 962 aaKnown RBP10.21□□□□□ -0.77
PTPN20-228ENST00000513266 USP12O75317 370 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 TOM1L1O75674 476 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 CLTAP09496 248 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 CPA1P15085 419 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 CKMT2P17540 419 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 ABCB4P21439 1286 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 PAX3P23760 479 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 ACSL1P33121 698 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 PEX3P56589 373 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 USP46P62068 366 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 PPP2R3AQ06190 1150 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 ST3GAL1Q11201 340 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 ANO4Q32M45 955 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 PIK3AP1Q6ZUJ8 805 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 CACUL1Q86Y37 369 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 BRF1Q92994 677 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 BIRC7Q96CA5 298 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 SIPA1Q96FS4 1042 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 ELF4Q99607 663 aaPredicted RBP10.21□□□□□ -0.77
PTPN20-228ENST00000513266 PKMYT1Q99640 499 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 NAP1L4Q99733 375 aaKnown RBP10.21□□□□□ -0.77
PTPN20-228ENST00000513266 TUFT1Q9NNX1 390 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 THSD1Q9NS62 852 aa10.21□□□□□ -0.77
PTPN20-228ENST00000513266 DNAJC17Q9NVM6 304 aaKnown RBP10.21□□□□□ -0.77
PTPN20-228ENST00000513266 STON1Q9Y6Q2 735 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms