RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 C15orf59Q2T9L4 293 aaPredicted RBP9.8□□□□□ -0.84
DHFR-206ENST00000513048 SH3PXD2AQ5TCZ1 1133 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 LRRC38Q5VT99 294 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 SDHAF4Q5VUM1 108 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 TXNRD3NBQ6F5E7 133 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 SIX6OS1Q8N1H7 587 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 SCAMP5Q8TAC9 235 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.8□□□□□ -0.84
DHFR-206ENST00000513048 AUTS2Q8WXX7 1259 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 NT5C3BQ969T7 300 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 MS4A14Q96JA4 679 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 PBKQ96KB5 322 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 SPATA17Q96L03 361 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 PEBP4Q96S96 227 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 GDF15Q99988 308 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 CARD9Q9H257 536 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 SMARCAL1Q9NZC9 954 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 EHD2Q9NZN4 543 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 CALCOCO1Q9P1Z2 691 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 FNIP2Q9P278 1114 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 STK39Q9UEW8 545 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 AFF4Q9UHB7 1163 aaKnown RBP9.8□□□□□ -0.84
DHFR-206ENST00000513048 LZTS1Q9Y250 596 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 SLC27A5Q9Y2P5 690 aa9.8□□□□□ -0.84
DHFR-206ENST00000513048 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
DHFR-206ENST00000513048 MYO16Q9Y6X6 1858 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 C2CD2LO14523 706 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 ENDOD1O94919 500 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 URODP06132 367 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 PYGMP11217 842 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 ATF6P18850 670 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 DNAJB1P25685 340 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 IL1R2P27930 398 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 PCK1P35558 622 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 MATKP42679 507 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 PGFP49763 221 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 HDAC4P56524 1084 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 USP46P62068 366 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 YWHAZP63104 245 aaKnown RBP9.79□□□□□ -0.84
DHFR-206ENST00000513048 PITX1P78337 314 aaPredicted RBP9.79□□□□□ -0.84
DHFR-206ENST00000513048 KRT17Q04695 432 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 DUSP4Q13115 394 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 SYPL2Q5VXT5 272 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 TPGS2Q68CL5 300 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 KIAA1841Q6NSI8 718 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 AADACL2Q6P093 401 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 BEND5Q7L4P6 421 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 ANKS1BQ7Z6G8 1248 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 SCD5Q86SK9 330 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 SCN4BQ8IWT1 228 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 RHOT1Q8IXI2 618 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 KATNAL2Q8IYT4 538 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 DEFB106AQ8N104 65 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 STKLD1Q8NE28 680 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 ZNF461Q8TAF7 563 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 SPPL3Q8TCT6 385 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 ACTRT1Q8TDG2 376 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 CAPZA3Q96KX2 299 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 RNPC3Q96LT9 517 aaKnown RBP9.79□□□□□ -0.84
DHFR-206ENST00000513048 CFAP57Q96MR6 1250 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 NPY6RQ99463 290 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 C17orf80Q9BSJ5 609 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.79□□□□□ -0.841e-16■■■■■ 49.9
DHFR-206ENST00000513048 HSFX1Q9UBD0 423 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 TTC7AQ9ULT0 858 aaPredicted RBP9.79□□□□□ -0.84
DHFR-206ENST00000513048 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
DHFR-206ENST00000513048 C3orf70A6NLC5 250 aaPredicted RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 FSCN2O14926 492 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 TEX28O15482 410 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 SART1O43290 800 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 TADA3O75528 432 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 SLU7O95391 586 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 TRUB2O95900 331 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 LTFP02788 710 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 CNPP09543 421 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 ATF2P15336 505 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 DNAJB2P25686 324 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 MIPP30301 263 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 SDC4P31431 198 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 CTNNB1P35222 781 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 NOS2P35228 1153 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 RWDD2BP57060 319 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 ERVFC1P60507 584 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 RPL10AP62906 217 aaKnown RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 ZNF211Q13398 564 aaPredicted RBP9.78□□□□□ -0.84
DHFR-206ENST00000513048 CAMK1Q14012 370 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 SLC25A52Q3SY17 297 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 LILRA6Q6PI73 481 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 STRADAQ7RTN6 431 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 POLNQ7Z5Q5 900 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 ZDHHC14Q8IZN3 488 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 NUP93Q8N1F7 819 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 UBL4BQ8N7F7 174 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 MYRIPQ8NFW9 859 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 CEP295NLQ96MC4 621 aa9.78□□□□□ -0.84
DHFR-206ENST00000513048 TBCBQ99426 244 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms