RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 CHFRQ96EP1 664 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 DUSP9Q99956 384 aaKnown RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 IER2Q9BTL4 223 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 DUSP16Q9BY84 665 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 NUP62CLQ9H1M0 184 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 LINC00597Q9H2U6 94 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 CSNK1G1Q9HCP0 422 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 PRMT8Q9NR22 394 aaPredicted RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 COMMD8Q9NX08 183 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 KIAA1468Q9P260 1216 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 HESX1Q9UBX0 185 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 NAGPAQ9UK23 515 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 NUDT5Q9UKK9 219 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 TSPAN16Q9UKR8 245 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 PCDHB4Q9Y5E5 795 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 ZNF638Q14966 1978 aaKnown RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 KIF26AQ9ULI4 1882 aaPredicted RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 MYO16Q9Y6X6 1858 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 CHURC1-FNTBB4DL54 471 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 PES1O00541 588 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TRDMT1O14717 391 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 MDM4O15151 490 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 OLFM2O95897 454 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ADH1CP00326 375 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 CYP17A1P05093 508 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 HMBSP08397 361 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RALAP11233 206 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ADH5P11766 374 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RARGP13631 454 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 KRT5P13647 590 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 DRD1P21728 446 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ATP5C1P36542 298 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 MTIF2P46199 727 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ID4P47928 161 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 PXNP49023 591 aaPredicted RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 FNTBP49356 437 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 PGFP49763 221 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TUBP50607 506 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TKTL1P51854 596 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 NRLP54845 237 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 KDSRQ06136 332 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 CCINQ13939 588 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 GAS6Q14393 721 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 DHCR24Q15392 516 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ANO4Q32M45 955 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ZNF528Q3MIS6 628 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 HSP90AA4PQ58FG1 418 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TMEM196Q5HYL7 178 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 BTBD8Q5XKL5 378 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RSRC2Q7L4I2 434 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TADA2BQ86TJ2 420 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 BBS7Q8IWZ6 715 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 SIX6OS1Q8N1H7 587 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 SYNPOQ8N3V7 929 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 NAT16Q8N8M0 369 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RPLP0P6Q8NHW5 317 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 UBA3Q8TBC4 463 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 KAT5Q92993 513 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 BHMTQ93088 406 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 FAXDC2Q96IV6 333 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 CNOT6LQ96LI5 555 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 MED15Q96RN5 788 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 FUCA2Q9BTY2 467 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 INTS2Q9H0H0 1204 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 NMUR1Q9HB89 426 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 LRRC4Q9HBW1 653 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 FBRSL1Q9HCM7 1045 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 C2orf42Q9NWW7 574 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 ZSCAN32Q9NX65 697 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TMEM63CQ9P1W3 806 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 TBC1D14Q9P2M4 693 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 NCDNQ9UBB6 729 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RWDD2AQ9UIY3 292 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RASAL2Q9UJF2 1139 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 LSM7Q9UK45 103 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 RAB23Q9ULC3 237 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 SLC8A2Q9UPR5 921 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 SCML2Q9UQR0 700 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 COQ4Q9Y3A0 265 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 PCDHGA2Q9Y5H1 932 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 HELZP42694 1942 aaKnown RBP6.85□□□□□ -1.31
KDM3B-208ENST00000512928 GREB1Q4ZG55 1949 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 DENND4CQ5VZ89 1909 aa6.85□□□□□ -1.31
KDM3B-208ENST00000512928 CACNA1IQ9P0X4 2223 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 RIF1Q5UIP0 2472 aaKnown RBP6.84□□□□□ -1.31
KDM3B-208ENST00000512928 E2F8A0AVK6 867 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 FAM92AA1XBS5 289 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 HHLA1C9JL84 531 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 NEDD8-MDP1E9PL57 170 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 M0QYV0 167 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 PIK3R2O00459 728 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 ATG13O75143 517 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 CALCAP01258 141 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 LCP1P13796 627 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 TCF3P15923 654 aa6.84□□□□□ -1.31
KDM3B-208ENST00000512928 PTMSP20962 102 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms