RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, human

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOBTB3-213	ENST00000512878	PNPLA8	Q9NP80	782 aa		13.53	□□□□□ -0.24
RHOBTB3-213	ENST00000512878	OSER1	Q9NX31	292 aa		13.53	□□□□□ -0.24
RHOBTB3-213	ENST00000512878	SCML2	Q9UQR0	700 aa		13.53	□□□□□ -0.24
RHOBTB3-213	ENST00000512878	BIN1	O00499	593 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	PMM2	O15305	246 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CYP26A1	O43174	497 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	RNF40	O75150	1001 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CYP17A1	P05093	508 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	OPRD1	P41143	372 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	PPP1R2	P41236	205 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	FMO5	P49326	533 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	KIF11	P52732	1056 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	UBE2H	P62256	183 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	AMPD2	Q01433	879 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	MESP2	Q0VG99	397 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	KLHL10	Q6JEL2	608 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SFTPA1	Q8IWL2	248 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	UBR7	Q8N806	425 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	NELFB	Q8WX92	580 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TMEM176A	Q96HP8	235 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	P2RY13	Q9BPV8	354 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	DUSP16	Q9BY84	665 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	FBXO44	Q9H4M3	255 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	PARD6A	Q9NPB6	346 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CYLD	Q9NQC7	956 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CFAP97	Q9P2B7	532 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CTNND2	Q9UQB3	1225 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	USP3	Q9Y6I4	520 aa		13.52	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SPTBN2	O15020	2390 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	GREM1	O60565	184 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TLR5	O60602	858 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	NFATC1	O95644	943 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TBX18	O95935	607 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	ACO1	P21399	889 aa	Known RBP	13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	DRD1	P21728	446 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TGM1	P22735	817 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	HOXA6	P31267	233 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	NRL	P54845	237 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CUL2	Q13617	745 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	PPP2R5D	Q14738	602 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	ARHGAP17	Q68EM7	881 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	RHBDF2	Q6PJF5	856 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	PRR23B	Q6ZRT6	265 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TTC39C	Q8N584	583 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	LMO3	Q8TAP4	145 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CD101	Q93033	1021 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	JAKMIP2	Q96AA8	810 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	HEXIM2	Q96MH2	286 aa	Known RBP	13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	NMUR1	Q9HB89	426 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	METTL14	Q9HCE5	456 aa	Known RBP	13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TLR8	Q9NR97	1041 aa	Known RBP	13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CHMP5	Q9NZZ3	219 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	NCDN	Q9UBB6	729 aa		13.51	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	E2F8	A0AVK6	867 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CHRM1	P11229	460 aa	Predicted RBP	13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TRIM21	P19474	475 aa	Known RBP	13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	ID4	P47928	161 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	MARS	P56192	900 aa	Known RBP	13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	STX17	P56962	302 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	NR1H3	Q13133	447 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	DHCR24	Q15392	516 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	RAB41	Q5JT25	222 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CCDC186	Q7Z3E2	898 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SCD5	Q86SK9	330 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	C12orf40	Q86WS4	652 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TTC30A	Q86WT1	665 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TRIM59	Q8IWR1	403 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	MED15	Q96RN5	788 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	KIAA1468	Q9P260	1216 aa		13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CNOT1	A5YKK6	2376 aa	Known RBP	13.5	□□□□□ -0.25
RHOBTB3-213	ENST00000512878		A0A1W2PQH9	124 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	BICDL2	A1A5D9	508 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878		K7EQS6	105 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TULP2	O00295	520 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SLC9A3R1	O14745	358 aa	Predicted RBP	13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SLC6A11	P48066	632 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	PAK1	Q13153	545 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CAMK4	Q16566	473 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CCDC40	Q4G0X9	1142 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	FBXO43	Q4G163	708 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	LONP2	Q86WA8	852 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	BBS7	Q8IWZ6	715 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	ZNF276	Q8N554	614 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TRIML1	Q8N9V2	468 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	ANKRD52	Q8NB46	1076 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	RPLP0P6	Q8NHW5	317 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	HHIP	Q96QV1	700 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	KLF16	Q9BXK1	252 aa	Predicted RBP	13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	TBC1D14	Q9P2M4	693 aa		13.49	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	CKAP5	Q14008	2032 aa		13.48	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	MDM4	O15151	490 aa		13.48	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	EIF2D	P41214	584 aa	Known RBP	13.48	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SEC13	P55735	322 aa		13.48	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SPEM2	Q0P670	501 aa		13.48	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	LRMP	Q12912	555 aa		13.48	□□□□□ -0.25
RHOBTB3-213	ENST00000512878	SIM2	Q14190	667 aa	Predicted RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms