RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TCP11X1B4DZS4 312 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 OGTO15294 1046 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TCN1P20061 433 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 PMLP29590 882 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ROR1Q01973 937 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 KLHL23Q8NBE8 558 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 GRAMD1AQ96CP6 724 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 GANQ9H2C0 597 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CCDC189A1A4V9 331 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 FAM153BP0C7A2 387 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 RARBP10826 455 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 ITGA8P53708 1063 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 TAP1Q03518 808 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 MYBPC2Q14324 1141 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 FAM153CQ494X1 144 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 FAM153AQ9UHL3 310 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 ADM5C9JUS6 153 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 STX7O15400 261 aaKnown RBP11.21□□□□□ -0.61
CPNE4-209ENST00000512055 TGFB1I1O43294 461 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 GZMAP12544 262 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 KCNA2P16389 499 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 ITIH2P19823 946 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 LSP1P33241 339 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 CORO7P57737 925 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 USF2Q15853 346 aaPredicted RBP11.21□□□□□ -0.61
CPNE4-209ENST00000512055 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.61
CPNE4-209ENST00000512055 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 ERO1BQ86YB8 467 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 FBXO25Q8TCJ0 367 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 FAM84AQ96KN4 292 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.61
CPNE4-209ENST00000512055 KIFC1Q9BW19 673 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 WWP1Q9H0M0 922 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 EPN3Q9H201 632 aa11.21□□□□□ -0.61
CPNE4-209ENST00000512055 CHN1P15882 459 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 MYL6P60660 151 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 PPIDQ08752 370 aaKnown RBP11.21□□□□□ -0.62
CPNE4-209ENST00000512055 NR1H3Q13133 447 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF677Q86XU0 584 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 MIEF2Q96C03 454 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 PRMT1Q99873 361 aaKnown RBP11.21□□□□□ -0.62
CPNE4-209ENST00000512055 AREL1O15033 823 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 MAGEB2O15479 319 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 HNRNPRO43390 633 aaKnown RBP11.21□□□□□ -0.62
CPNE4-209ENST00000512055 PEX5P50542 639 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 GLRA4Q5JXX5 417 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 WLSQ5T9L3 541 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 KLHL24Q6TFL4 600 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 LRIG3Q6UXM1 1119 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 PPP1R36Q96LQ0 422 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 FAM129BQ96TA1 746 aa11.21□□□□□ -0.62
CPNE4-209ENST00000512055 PRMT7Q9NVM4 692 aaPredicted RBP11.21□□□□□ -0.62
CPNE4-209ENST00000512055 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 IDH3BO43837 385 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CST8O60676 142 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 VTNP04004 478 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CTSHP09668 335 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CYP2B6P20813 491 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 DSG1Q02413 1049 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 DNAL1Q4LDG9 190 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 SAMD3Q8N6K7 520 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 HPDLQ96IR7 371 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 POLR1BQ9H9Y6 1135 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 PSTPIP1O43586 416 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 EIF2S3P41091 472 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 SFSWAPQ12872 951 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 FAPQ12884 760 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 TRIM32Q13049 653 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 PIGHQ14442 188 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 TAF5Q15542 800 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 KCNT1Q5JUK3 1230 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 HYIQ5T013 277 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CYB5D1Q6P9G0 228 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 ERP27Q96DN0 273 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 IARS2Q9NSE4 1012 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 KLHL8Q9P2G9 620 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CARD8Q9Y2G2 431 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 RPH3AQ9Y2J0 694 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 UGCGQ16739 394 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 ZSWIM7Q19AV6 140 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 SLC13A1Q9BZW2 595 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CASS4Q9NQ75 786 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 METTL5Q9NRN9 209 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 ADARB2Q9NS39 739 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms