RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 LRRC53A6NM62 1247 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 FAM170BA6NMN3 283 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 M0QYV0 167 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 TULP2O00295 520 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 DPYSL4O14531 572 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 CHADO15335 359 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 GYPCP04921 128 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 WEE1P30291 646 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 NUBP1P53384 320 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 ARID5AQ03989 594 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 PTK2Q05397 1052 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 PDE4CQ08493 712 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 IFRD2Q12894 506 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 CNGA2Q16280 664 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 E4F1Q66K89 784 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 SMYD5Q6GMV2 418 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 DENND1BQ6P3S1 775 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 DENND5BQ6ZUT9 1274 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 GPRIN1Q7Z2K8 1008 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 YAF2Q8IY57 180 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 ZNF687Q8N1G0 1237 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 ANKRD52Q8NB46 1076 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 E2F7Q96AV8 911 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 TTLL2Q9BWV7 592 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 GTSE1Q9NYZ3 720 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 HELZP42694 1942 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-220ENST00000511002 A0A1W2PQJ5 194 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 HHLA1C9JL84 531 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 CYP11B1P15538 503 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 PDE6CP51160 858 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 BCAT1P54687 386 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 ANGPT1Q15389 498 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 STILQ15468 1287 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 PKDCCQ504Y2 493 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 TRIM68Q6AZZ1 485 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 CELF5Q8N6W0 485 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 ARL14EPQ8N8R7 260 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 EPS8L1Q8TE68 723 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 SLC20A1Q8WUM9 679 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 CPLX3Q8WVH0 158 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 SECISBP2LQ93073 1101 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 TRPV5Q9NQA5 729 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 NOCTQ9UK39 431 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 NDRG2Q9UN36 371 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 PIAS3Q9Y6X2 628 aa16.38■□□□□ 0.21
SH3TC1-220ENST00000511002 OTOL1A6NHN0 477 aaPredicted RBP16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 TNFRSF10BO14763 440 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 MED7O43513 233 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 DDX6P26196 483 aaKnown RBP eCLIP16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 AVPR1AP37288 418 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 SLC5A3P53794 718 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 BPIFB4P59827 614 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 ZXDBP98169 803 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 TAF10Q12962 218 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 TXNDC11Q6PKC3 985 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 TMC6Q7Z403 805 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 SCAMP5Q8TAC9 235 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 DDX1Q92499 740 aaKnown RBP16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 ATOH1Q92858 354 aaPredicted RBP16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 EDEM3Q9BZQ6 932 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 HPS4Q9NQG7 708 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 GKN1Q9NS71 199 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 TDP1Q9NUW8 608 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 MYO6Q9UM54 1294 aa16.37■□□□□ 0.21
SH3TC1-220ENST00000511002 XPO1O14980 1071 aaKnown RBP16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 SETSIPP0DME0 302 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 ARSAP15289 507 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 CASP14P31944 242 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 PGFP49763 221 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 ASIC2Q16515 512 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 ARHGAP29Q52LW3 1261 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 ZNF852Q6ZMS4 543 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 MAML2Q8IZL2 1156 aaPredicted RBP16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 NUP93Q8N1F7 819 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 TTC16Q8NEE8 873 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 IQCDQ96DY2 449 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 CHFRQ96EP1 664 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 MRFAP1L1Q96HT8 127 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 CEP295NLQ96MC4 621 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 CYTH4Q9UIA0 394 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 CAPN11Q9UMQ6 739 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.36■□□□□ 0.21
SH3TC1-220ENST00000511002 TRAV19A0A0A6YYK7 116 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 FAM170AA1A519 330 aa16.35■□□□□ 0.21
SH3TC1-220ENST00000511002 ZNF840PA6NDX5 716 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms