RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 C1QTNF7Q9BXJ2 289 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 SLC32A1Q9H598 525 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 PLK2Q9NYY3 685 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
LIN54-210ENST00000510877 DICER1Q9UPY3 1922 aaKnown RBP13.02□□□□□ -0.33
LIN54-210ENST00000510877 M0QYT0 321 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 H2AFZP0C0S5 128 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 MAGEA9P43362 315 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 FAM46CQ5VWP2 391 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 TXNDC8Q6A555 127 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 H2AFVQ71UI9 128 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 MON1AQ86VX9 555 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 SCG3Q8WXD2 468 aaKnown RBP13.02□□□□□ -0.33
LIN54-210ENST00000510877 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.02□□□□□ -0.33
LIN54-210ENST00000510877 EBF3Q9H4W6 596 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 DHX35Q9H5Z1 703 aaKnown RBP13.02□□□□□ -0.33
LIN54-210ENST00000510877 PCDHGC5Q9Y5F6 944 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 P4HA2O15460 535 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 COPB1P53618 953 aaKnown RBP13.01□□□□□ -0.33
LIN54-210ENST00000510877 TPI1P60174 286 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 MTF1Q14872 753 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 SEL1L2Q5TEA6 688 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 DENND1CQ8IV53 801 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 FGF13Q92913 245 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 P2RY13Q9BPV8 354 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 YY1AP1Q9H869 796 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 KBTBD4Q9NVX7 518 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 IL1BP01584 269 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 CCR1P32246 355 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 GEMIN4P57678 1058 aaKnown RBP13.01□□□□□ -0.33
LIN54-210ENST00000510877 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
LIN54-210ENST00000510877 FAM35AQ86V20 835 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 COLGALT2Q8IYK4 626 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 SETD7Q8WTS6 366 aaKnown RBP13.01□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D17Q9HA65 648 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 NAV1Q8NEY1 1877 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 CYP26A1O43174 497 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 NPR3P17342 541 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 MAGEA1P43355 309 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 ATP11CQ8NB49 1132 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 NUSAP1Q9BXS6 441 aaKnown RBP13.01□□□□□ -0.33
LIN54-210ENST00000510877 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 SAMD15Q9P1V8 674 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 RHOBTB1O94844 696 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 KCNE1P15382 129 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 VAV2P52735 878 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 ANKRD40Q6AI12 368 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 FOXR1Q6PIV2 292 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 KCTD6Q8NC69 237 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 TSPAN16Q9UKR8 245 aa13.01□□□□□ -0.33
LIN54-210ENST00000510877 SMCHD1A6NHR9 2005 aa13□□□□□ -0.33
LIN54-210ENST00000510877 MEIS3P2A8K0S8 358 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TSTA3Q13630 321 aaPredicted RBP13□□□□□ -0.33
LIN54-210ENST00000510877 FBXO43Q4G163 708 aa13□□□□□ -0.33
LIN54-210ENST00000510877 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
LIN54-210ENST00000510877 NOP9Q86U38 636 aaKnown RBP13□□□□□ -0.33
LIN54-210ENST00000510877 LGI2Q8N0V4 545 aa13□□□□□ -0.33
LIN54-210ENST00000510877 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
LIN54-210ENST00000510877 MYCBPAPQ8TBZ2 947 aa13□□□□□ -0.33
LIN54-210ENST00000510877 FANCLQ9NW38 375 aa13□□□□□ -0.33
LIN54-210ENST00000510877 HCSTQ9UBK5 93 aa13□□□□□ -0.33
LIN54-210ENST00000510877 FAM169AQ9Y6X4 670 aa13□□□□□ -0.33
LIN54-210ENST00000510877 KRT3P12035 628 aa13□□□□□ -0.33
LIN54-210ENST00000510877 SUZ12Q15022 739 aaKnown RBP13□□□□□ -0.33
LIN54-210ENST00000510877 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
LIN54-210ENST00000510877 PRCCQ92733 491 aaPredicted RBP13□□□□□ -0.33
LIN54-210ENST00000510877 SMYD3Q9H7B4 428 aa13□□□□□ -0.33
LIN54-210ENST00000510877 CATSPERBQ9H7T0 1116 aa13□□□□□ -0.33
LIN54-210ENST00000510877 MED4Q9NPJ6 270 aa13□□□□□ -0.33
LIN54-210ENST00000510877 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
LIN54-210ENST00000510877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13□□□□□ -0.339e-9■■■■■ 32.5
LIN54-210ENST00000510877 IMPACTQ9P2X3 320 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3DA0A087WVF3 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3EA0A087X179 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 CTSEP14091 401 aa13□□□□□ -0.33
LIN54-210ENST00000510877 DGKGP49619 791 aa13□□□□□ -0.33
LIN54-210ENST00000510877 SLC44A4Q53GD3 710 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
LIN54-210ENST00000510877 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
LIN54-210ENST00000510877 ARHGEF26Q96DR7 871 aa13□□□□□ -0.33
LIN54-210ENST00000510877 PPP1R16AQ96I34 528 aa13□□□□□ -0.33
LIN54-210ENST00000510877 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms