RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 NCAPH2Q6IBW4 605 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 OVOS1Q6IE37 1185 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 MRPL14Q6P1L8 145 aaKnown RBP4.16□□□□□ -1.74
RNF4-211ENST00000509206 KDM7AQ6ZMT4 941 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 USP53Q70EK8 1073 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 ERICH1Q86X53 443 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 METTL23Q86XA0 190 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 MB21D2Q8IYB1 491 aaPredicted RBP4.16□□□□□ -1.74
RNF4-211ENST00000509206 CHPFQ8IZ52 775 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 THEM5Q8N1Q8 247 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 CCDC148Q8NFR7 591 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 BEST2Q8NFU1 509 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 TBCKQ8TEA7 893 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 SH3RF2Q8TEC5 729 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 CRYGNQ8WXF5 182 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 LENG9Q96B70 501 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 SKA1Q96BD8 255 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 TOE1Q96GM8 510 aaKnown RBP4.16□□□□□ -1.74
RNF4-211ENST00000509206 DYDC2Q96IM9 177 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 CYP2S1Q96SQ9 504 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 MMS19Q96T76 1030 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNF4-211ENST00000509206 LRRC2Q9BYS8 371 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 GRIP2Q9C0E4 1043 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 ZMYND12Q9H0C1 365 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 CRISPLD1Q9H336 500 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 FZD8Q9H461 694 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 HSFX1Q9UBD0 423 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 UXTQ9UBK9 157 aaPredicted RBP4.16□□□□□ -1.74
RNF4-211ENST00000509206 EIF2B4Q9UI10 523 aaKnown RBP4.16□□□□□ -1.74
RNF4-211ENST00000509206 ANKRD6Q9Y2G4 727 aa4.16□□□□□ -1.74
RNF4-211ENST00000509206 UBR5O95071 2799 aaPredicted RBP4.16□□□□□ -1.74
RNF4-211ENST00000509206 CCDC196A0A1B0GTZ2 297 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 ESYT2A0FGR8 921 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 ANTXRLA6NF34 631 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 PCDHGA12O60330 932 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 DFNA5O60443 496 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 USO1O60763 962 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 ADAM23O75077 832 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 PPFIA2O75334 1257 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 PRPF40AO75400 957 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 BAG4O95429 457 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 GJB6O95452 261 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 LARGE1O95461 756 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 F11P03951 625 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 NFICP08651 508 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 BMP2P12643 396 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 RNF144AP50876 292 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 GABREP78334 506 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 HNRNPUQ00839 825 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNF4-211ENST00000509206 E2F1Q01094 437 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 GAD2Q05329 585 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 SOX4Q06945 474 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 STARD3Q14849 445 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 DHCR24Q15392 516 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 ZNF77Q15935 545 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 PFKFB3Q16875 520 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 FAM187BQ17R55 369 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 HS1BP3Q53T59 392 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 C10orf76Q5T2E6 689 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 EEF1DP3Q658K8 133 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 TRIM46Q7Z4K8 759 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 ATCAYQ86WG3 371 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 DCP1BQ8IZD4 617 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 LINC00528Q8N1L1 170 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 NAT16Q8N8M0 369 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 ARL14EPQ8N8R7 260 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 EXD3Q8N9H8 876 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 CADM4Q8NFZ8 388 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 IPO4Q8TEX9 1081 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 C2orf15Q8WU43 125 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 SCFD1Q8WVM8 642 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 DNASE2BQ8WZ79 361 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 IGSF8Q969P0 613 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 C18orf25Q96B23 403 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 IFT43Q96FT9 208 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 IFT74Q96LB3 600 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 DMRTB1Q96MA1 342 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 FAM20AQ96MK3 541 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 PSMG3-AS1Q96PY0 264 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 INSM2Q96T92 566 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 LNPKQ9C0E8 428 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 TMEM206Q9H813 350 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 XPNPEP1Q9NQW7 623 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 THSD1Q9NS62 852 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 STARD5Q9NSY2 213 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 ABI2Q9NYB9 513 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 RGL1Q9NZL6 768 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 DEC1Q9P2X7 70 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 PLEKHB1Q9UF11 243 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 DDX25Q9UHL0 483 aaKnown RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 USP20Q9Y2K6 914 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 NFE2L3Q9Y4A8 694 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 SNX11Q9Y5W9 270 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 KIF26AQ9ULI4 1882 aaPredicted RBP4.15□□□□□ -1.75
RNF4-211ENST00000509206 CNTNAP5Q8WYK1 1306 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 STK36Q9NRP7 1315 aa4.15□□□□□ -1.75
RNF4-211ENST00000509206 NID2Q14112 1375 aa4.14□□□□□ -1.75
RNF4-211ENST00000509206 MGAQ8IWI9 3026 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms