RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 SPHK2Q9NRA0 654 aa9.3□□□□□ -0.92
HMGCR-207ENST00000509085 DNAAF2Q9NVR5 837 aaKnown RBP9.3□□□□□ -0.92
HMGCR-207ENST00000509085 HSPBP1Q9NZL4 362 aa9.3□□□□□ -0.92
HMGCR-207ENST00000509085 CALCOCO1Q9P1Z2 691 aa9.3□□□□□ -0.92
HMGCR-207ENST00000509085 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
HMGCR-207ENST00000509085 WDFY3Q8IZQ1 3526 aa9.3□□□□□ -0.92
HMGCR-207ENST00000509085 UBE4BO95155 1302 aa9.3□□□□□ -0.92
HMGCR-207ENST00000509085 ATXN2Q99700 1313 aaKnown RBP9.3□□□□□ -0.92
HMGCR-207ENST00000509085 A8MXQ7 604 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 COCHO43405 550 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 TULP3O75386 442 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 GABRG2P18507 467 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 TNNI1P19237 187 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 ATICP31939 592 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 RING1Q06587 406 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 MESP2Q0VG99 397 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 PSMD6Q15008 389 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 SNRNP35Q16560 246 aaKnown RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 WDR72Q3MJ13 1102 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 SYCP2LQ5T4T6 812 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 EMC10Q5UCC4 262 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 SCARA3Q6AZY7 606 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 GRAMD4Q6IC98 578 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 RAB44Q7Z6P3 723 aaPredicted RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 PROSER1Q86XN7 944 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 CBWD2Q8IUF1 395 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 SFTPA1Q8IWL2 248 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 FOXJ1Q92949 421 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 SYAP1Q96A49 352 aaPredicted RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 XPO6Q96QU8 1125 aaKnown RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 CGRRF1Q99675 332 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 MRPL45Q9BRJ2 306 aaKnown RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 ZDHHC5Q9C0B5 715 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 ZNF518BQ9C0D4 1074 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 NACA2Q9H009 215 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 CUEDC2Q9H467 287 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 UPF2Q9HAU5 1272 aaKnown RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 DMAP1Q9NPF5 467 aaPredicted RBP9.29□□□□□ -0.92
HMGCR-207ENST00000509085 ADAMTS9Q9P2N4 1935 aa9.29□□□□□ -0.92
HMGCR-207ENST00000509085 IGHV1OR15-9A0A0B4J2B8 117 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 FAM92AA1XBS5 289 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 ANTXRLA6NF34 631 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 GFRA2O00451 464 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 CACNG3O60359 315 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 ZDHHC11BP0C7U3 371 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 DLATP10515 647 aaKnown RBP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 GNSP15586 552 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 TRIM21P19474 475 aaKnown RBP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 ZNF132P52740 706 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 AMPD3Q01432 767 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 IFRD2Q12894 506 aaPredicted RBP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 TRPC3Q13507 836 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 E2F5Q15329 346 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 ANO4Q32M45 955 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 C8orf34Q49A92 452 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 WDR45BQ5MNZ6 344 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 FAM35AQ86V20 835 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 BBS7Q8IWZ6 715 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 CHPFQ8IZ52 775 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 SCFD1Q8WVM8 642 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 ADAMTS14Q8WXS8 1223 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 SMARCD1Q96GM5 515 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 FAM84AQ96KN4 292 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 TNIP3Q96KP6 325 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 HSPA12BQ96MM6 686 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 GABRG3Q99928 467 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 FGFBP2Q9BYJ0 223 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 FBXO44Q9H4M3 255 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 DNAJC17Q9NVM6 304 aaKnown RBP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 IL37Q9NZH6 218 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 MARK1Q9P0L2 795 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 WDR35Q9P2L0 1181 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 CGNQ9P2M7 1197 aaKnown RBP9.28□□□□□ -0.92
HMGCR-207ENST00000509085 NFE2L3Q9Y4A8 694 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
HMGCR-207ENST00000509085 DSPP15924 2871 aaKnown RBP9.27□□□□□ -0.92
HMGCR-207ENST00000509085 A0A1W2PQF6 199 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 TAF4O00268 1085 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
HMGCR-207ENST00000509085 NPC1O15118 1278 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 NDUFS2O75306 463 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 CST3P01034 146 aaPredicted RBP9.27□□□□□ -0.93
HMGCR-207ENST00000509085 CD59P13987 128 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 HOXB3P14651 431 aaPredicted RBP9.27□□□□□ -0.93
HMGCR-207ENST00000509085 AP3M2P53677 418 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 SLC5A3P53794 718 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 CYP24A1Q07973 514 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 TRIP6Q15654 476 aaKnown RBP9.27□□□□□ -0.93
HMGCR-207ENST00000509085 PLEKHG6Q3KR16 790 aa9.27□□□□□ -0.93
HMGCR-207ENST00000509085 HTR3DQ70Z44 454 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms