RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ATP5C1P36542 298 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 DRAP1Q14919 205 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 MLF2Q15773 248 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ZNF77Q15935 545 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 FILIP1LQ4L180 1135 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ASTLQ6HA08 431 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 HTR3DQ70Z44 454 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 SCD5Q86SK9 330 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 RALGPS2Q86X27 583 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 AOPEPQ8N6M6 819 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ARL14EPQ8N8R7 260 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 SLC22A12Q96S37 553 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 CYP2S1Q96SQ9 504 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ZSWIM1Q9BR11 485 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 TRIM62Q9BVG3 475 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 IRX2Q9BZI1 471 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 ARHGEF3Q9NR81 526 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 GKN1Q9NS71 199 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 OLA1Q9NTK5 396 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 TAB2Q9NYJ8 693 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 FBXL21Q9UKT6 434 aa11.15□□□□□ -0.62
POLR2J3-213ENST00000508848 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 KANSL1LA0AUZ9 987 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 SYCE3A1L190 88 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 NCAM2O15394 837 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 COCHO43405 550 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 TLR5O60602 858 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 GLI1P08151 1106 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 RALAP11233 206 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 KRT5P13647 590 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 AOC1P19801 751 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 GNA15P30679 374 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 CDH5P33151 784 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 RPS9P46781 194 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 TKTL1P51854 596 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 CDR1P51861 262 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 KPNA1P52294 538 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 JAM2P57087 298 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 TPM4P67936 248 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 COG7P83436 770 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 UBXN1Q04323 297 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 NR1H3Q13133 447 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 MTF1Q14872 753 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 GOLGA7BQ2TAP0 167 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ITPRIPL2Q3MIP1 535 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 FIGNQ5HY92 759 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 PMF1Q6P1K2 205 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 CC2D1AQ6P1N0 951 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ZNF852Q6ZMS4 543 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 GPRIN1Q7Z2K8 1008 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ADGRG2Q8IZP9 1017 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 SH3RF2Q8TEC5 729 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 OSCP1Q8WVF1 389 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ATP2A3Q93084 1043 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 EXOC4Q96A65 974 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 CLDN23Q96B33 292 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 IQCDQ96DY2 449 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 IRF2BPLQ9H1B7 796 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 GANQ9H2C0 597 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 LRRC4Q9HBW1 653 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ABCC13Q9NSE7 274 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 CCL26Q9Y258 94 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 ZNF510Q9Y2H8 683 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 CACNA1IQ9P0X4 2223 aa11.14□□□□□ -0.63
POLR2J3-213ENST00000508848 MYOFQ9NZM1 2061 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 KMT2EQ8IZD2 1858 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 MUC6Q6W4X9 2439 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 SHISA7A6NL88 538 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 PES1O00541 588 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 CYP26A1O43174 497 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 CFHP08603 1231 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 CCDC172P0C7W6 258 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 BRD2P25440 801 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 AVPR2P30518 371 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 KRT9P35527 623 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 SCNN1AP37088 669 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 ZXDBP98169 803 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 GOLGA8FQ08AF8 430 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 GOLGA8DPQ0D2H9 430 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 RUNX3Q13761 415 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 NR1I3Q14994 352 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 NFKBIBQ15653 356 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 ARHGAP44Q17R89 818 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 MSANTD2Q6P1R3 559 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 GJB7Q6PEY0 223 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 BHLHA9Q7RTU4 235 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 ZDHHC17Q8IUH5 632 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 SUGP1Q8IWZ8 645 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 SIX5Q8N196 739 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 SYNPOQ8N3V7 929 aa11.13□□□□□ -0.63
POLR2J3-213ENST00000508848 CSGALNACT1Q8TDX6 532 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms