RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 GDF15Q99988 308 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 TRIM6Q9C030 488 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 NSUN3Q9H649 340 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 KIAA1586Q9HCI6 787 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 POLD4Q9HCU8 107 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PTPRHQ9HD43 1115 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC39A2Q9NP94 309 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 TYW1Q9NV66 732 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 IMPACTQ9P2X3 320 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 TNFRSF10DQ9UBN6 386 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 MAN1B1Q9UKM7 699 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZMYND8Q9ULU4 1186 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 TRAF3IP3Q9Y228 551 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PIN4Q9Y237 131 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 YBX2Q9Y2T7 364 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 BICDL2A1A5D9 508 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 C2orf71A6NGG8 1288 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 HNRNPDLO14979 420 aaKnown RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MAPK13O15264 365 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRPF6O94906 941 aaKnown RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 FGFR1OPO95684 399 aaKnown RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 KRT1P04264 644 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MYBP10242 640 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 CASP1P29466 404 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MAGEA10P43363 369 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 NOP2P46087 812 aaKnown RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MVKQ03426 396 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 CHRNEQ04844 493 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 LRRC63Q05C16 580 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ENPEPQ07075 957 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MCL1Q07820 350 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MYO9BQ13459 2157 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 NOLC1Q14978 699 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 SURF1Q15526 300 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF124Q15973 351 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 CAMK4Q16566 473 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 EDRF1Q3B7T1 1238 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZC2HC1CQ53FD0 456 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TMEM240Q5SV17 173 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 MBLAC2Q68D91 279 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 GTF2IRD2BQ6EKJ0 949 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 CENPPQ6IPU0 288 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 CAVIN1Q6NZI2 390 aaKnown RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 SASS6Q6UVJ0 657 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF365Q70YC5 407 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 GTF2IRD2Q86UP8 949 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ADSSL1Q8N142 457 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 LILRA2Q8N149 483 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 KIAA0895Q8NCT3 520 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 BTN2A2Q8WVV5 523 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 KISS1RQ969F8 398 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TOP1MTQ969P6 601 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF668Q96K58 619 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TSG101Q99816 390 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ADAM2Q99965 735 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TCHPQ9BT92 498 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 KIFC3Q9BVG8 833 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 CCDC94Q9BW85 323 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 NKX2-4Q9H2Z4 354 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 KCTD10Q9H3F6 313 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TMX1Q9H3N1 280 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 PDZD7Q9H5P4 517 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 PLEKHA5Q9HAU0 1116 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TOPORSQ9NS56 1045 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANO10Q9NW15 660 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TMEM161AQ9NX61 479 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 TBC1D7Q9P0N9 293 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 FBLN5Q9UBX5 448 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 GIT1Q9Y2X7 761 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 PCDHB7Q9Y5E2 793 aa5.95□□□□□ -1.46
HMGB1P44-201ENST00000508597 A0A0B4J269 797 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 MYOCOSA0A1B0GUC4 107 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 H0YGN5 161 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 ABLIM1O14639 778 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 OGTO15294 1046 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 INPPL1O15357 1258 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 TNRC18O15417 2968 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 B4GALT5O43286 388 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 CSDE1O75534 798 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 SCG5P05408 212 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 ADRB2P07550 413 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 CLTAP09496 248 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 CCDC192P0DO97 292 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRKCAP17252 672 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 FGFR4P22455 802 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 CCNE1P24864 410 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRCPP42785 496 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 MATR3P43243 847 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 CASP5P51878 434 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 WDR5P61964 334 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 FKBP3Q00688 224 aaKnown RBP5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 AMPD2Q01433 879 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 TCEA2Q15560 299 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 STX1AQ16623 288 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF568Q3ZCX4 644 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 FOXB2Q5VYV0 432 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 ARMCX5Q6P1M9 558 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 C16orf59Q7L2K0 433 aa5.94□□□□□ -1.46
HMGB1P44-201ENST00000508597 USP37Q86T82 979 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms