RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TNRC6BQ9UPQ9 1833 aaKnown RBP17.16■□□□□ 0.34
LMNA-222ENST00000508500 GREM1O60565 184 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 TBX18O95935 607 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 KRT13P13646 458 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 CD58P19256 250 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 TUBP50607 506 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 DMC1Q14565 340 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 ZC3H3Q8IXZ2 948 aaKnown RBP17.15■□□□□ 0.34
LMNA-222ENST00000508500 CAMKK1Q8N5S9 505 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 USP33Q8TEY7 942 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 GAB3Q8WWW8 586 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 CNTNAP3BQ96NU0 1288 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 RTKNQ9BST9 563 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 CNTNAP3Q9BZ76 1288 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 NIF3L1Q9GZT8 377 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 NMUR1Q9HB89 426 aa17.15■□□□□ 0.34
LMNA-222ENST00000508500 PI4KAP42356 2102 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 E2F8A0AVK6 867 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 SEC13P55735 322 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 COBLL1Q53SF7 1204 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 LY6G5CQ5SRR4 150 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 PPP1R26Q5T8A7 1209 aaPredicted RBP17.14■□□□□ 0.33
LMNA-222ENST00000508500 ZNF658Q5TYW1 1059 aaPredicted RBP17.14■□□□□ 0.33
LMNA-222ENST00000508500 KRT39Q6A163 491 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 CEP68Q76N32 757 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 KBTBD6Q86V97 674 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 BBS7Q8IWZ6 715 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 PHTF2Q8N3S3 785 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 TATDN2Q93075 761 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 JAKMIP2Q96AA8 810 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 ARID3AQ99856 593 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 NT5C1AQ9BXI3 368 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 SEMA4GQ9NTN9 838 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 PCDHA5Q9Y5H7 936 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 GON4LQ3T8J9 2241 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 LAMA1P25391 3075 aa17.14■□□□□ 0.33
LMNA-222ENST00000508500 CNOT1A5YKK6 2376 aaKnown RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 A0A0A0MRY4 1105 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 SLC9A3R1O14745 358 aaPredicted RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 RPP40O75818 363 aaKnown RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 FAM200BP0CF97 657 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
LMNA-222ENST00000508500 GTF2H1P32780 548 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 CBWD6Q4V339 395 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 ZNF394Q53GI3 561 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 C2orf27AQ580R0 203 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 ANKRD40Q6AI12 368 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 DDX42Q86XP3 938 aaKnown RBP eCLIP17.13■□□□□ 0.33
LMNA-222ENST00000508500 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 KLF16Q9BXK1 252 aaPredicted RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 IMPG2Q9BZV3 1241 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 CDV3Q9UKY7 258 aaKnown RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 SCML2Q9UQR0 700 aa17.13■□□□□ 0.33
LMNA-222ENST00000508500 MAP1BP46821 2468 aaKnown RBP17.13■□□□□ 0.33
LMNA-222ENST00000508500 DCDC2BA2VCK2 349 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 SLC30A4O14863 429 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 AXIN1O15169 862 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 CETN3O15182 167 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 CYP26A1O43174 497 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 TLR5O60602 858 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 IRF1P10914 325 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 MXI1P50539 228 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 CSRP2Q16527 193 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 EMC10Q5UCC4 262 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 SCD5Q86SK9 330 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 ETFBKMTQ8IXQ9 262 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 SLC4A11Q8NBS3 891 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 FBXL13Q8NEE6 735 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 GSDMAQ96QA5 445 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 PNKPQ96T60 521 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 DUSP9Q99956 384 aaKnown RBP17.12■□□□□ 0.33
LMNA-222ENST00000508500 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 ZDHHC4Q9NPG8 344 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 RAB20Q9NX57 234 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 TBC1D14Q9P2M4 693 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 EBF1Q9UH73 591 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
LMNA-222ENST00000508500 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 DCLK1O15075 740 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 MDM4O15151 490 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 GDF9O60383 454 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 ADH5P11766 374 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 ACO1P21399 889 aaKnown RBP17.11■□□□□ 0.33
LMNA-222ENST00000508500 EIF2DP41214 584 aaKnown RBP17.11■□□□□ 0.33
LMNA-222ENST00000508500 KIR2DL1P43626 348 aaPredicted RBP17.11■□□□□ 0.33
LMNA-222ENST00000508500 KIF11P52732 1056 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 RAD23BP54727 409 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 CCDC6Q16204 474 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 TMEM92Q6UXU6 159 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 PRR23CQ6ZRP0 262 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 TMEM25Q86YD3 366 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms