RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ARRDC1-AS1Q9H2J1 176 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 GDPD2Q9HCC8 539 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 CHD8Q9HCK8 2581 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 COMMD8Q9NX08 183 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 ABCA7Q8IZY2 2146 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 DCDC2BA2VCK2 349 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 ZNF202O95125 648 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 ADH1CP00326 375 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 ADH5P11766 374 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 SLC6A11P48066 632 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 CCDC6Q16204 474 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 PLK5Q496M5 336 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 C2orf27AQ580R0 203 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 PLA2G2CQ5R387 149 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 CLEC20AQ6ZU45 233 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 SMYD4Q8IYR2 804 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 PHTF2Q8N3S3 785 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 TSTD1Q8NFU3 115 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 WHAMMQ8TF30 809 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 WBP2Q969T9 261 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 OTUB2Q96DC9 234 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 HNRNPABQ99729 332 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 IMPG2Q9BZV3 1241 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 NIF3L1Q9GZT8 377 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 MMP17Q9ULZ9 603 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 NUP205Q92621 2012 aa13.76□□□□□ -0.21
HMGCS1-205ENST00000508319 HHLA1C9JL84 531 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 DCLK1O15075 740 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 FOXD2O60548 495 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 TLR5O60602 858 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 CILPO75339 1184 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 KAT7O95251 611 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 FAM200BP0CF97 657 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 KRT13P13646 458 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 ADORA2BP29275 332 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 PSMC2P35998 433 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 ADAM9Q13443 819 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 SF3A2Q15428 464 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 LY6G5CQ5SRR4 150 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 RASSF3Q86WH2 238 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 BBS7Q8IWZ6 715 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 ETFBKMTQ8IXQ9 262 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 PNKPQ96T60 521 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 FBXO44Q9H4M3 255 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 CYP3A43Q9HB55 503 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 CYLDQ9NQC7 956 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 PCDHGA5Q9Y5G8 931 aa13.75□□□□□ -0.21
HMGCS1-205ENST00000508319 PLXND1Q9Y4D7 1925 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 A0A0A0MRY4 1105 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 HAX1O00165 279 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 CYP26A1O43174 497 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 HOXC11O43248 304 aaPredicted RBP13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 GREM1O60565 184 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 ZNF806P0C7X5 589 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 CD58P19256 250 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 MPLP40238 635 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 DGKEP52429 567 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 MRPS21P82921 87 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 KDSRQ06136 332 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 CRY1Q16526 586 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 ANO7Q6IWH7 933 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 TMEM92Q6UXU6 159 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 ALLCQ8N6M5 410 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 IL17RCQ8NAC3 791 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 MDGA1Q8NFP4 955 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 JAKMIP2Q96AA8 810 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 CYFIP2Q96F07 1278 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 EEF2KMTQ96G04 330 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 NT5C1AQ9BXI3 368 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 TPSD1Q9BZJ3 242 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 PNPLA8Q9NP80 782 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 ARHGEF4Q9NR80 690 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 RXFP3Q9NSD7 469 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 OSER1Q9NX31 292 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 SCML2Q9UQR0 700 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 THADAQ6YHU6 1953 aa13.74□□□□□ -0.21
HMGCS1-205ENST00000508319 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 SGK1O00141 431 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 TBX18O95935 607 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 APODP05090 189 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 IRF1P10914 325 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 GTF2H1P32780 548 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 GRIA2P42262 883 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 MXI1P50539 228 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 PNOCQ13519 176 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 ELF2Q15723 593 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms