RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 TBC1D14Q9P2M4 693 aa17.22■□□□□ 0.35
SNX2-205ENST00000506874 CGNQ9P2M7 1197 aaKnown RBP17.22■□□□□ 0.35
SNX2-205ENST00000506874 SH3BP1Q9Y3L3 701 aa17.22■□□□□ 0.35
SNX2-205ENST00000506874 PI4KAP42356 2102 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 USP24Q9UPU5 2620 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 LNP1A1A4G5 178 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 LRRIQ3A6PVS8 624 aaPredicted RBP17.21■□□□□ 0.35
SNX2-205ENST00000506874 SGK1O00141 431 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 KHNYNO15037 678 aaKnown RBP17.21■□□□□ 0.35
SNX2-205ENST00000506874 ALDH1A2O94788 518 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 RPN1P04843 607 aaKnown RBP17.21■□□□□ 0.35
SNX2-205ENST00000506874 IRF1P10914 325 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 NOVA1P51513 510 aaKnown RBP17.21■□□□□ 0.35
SNX2-205ENST00000506874 STK4Q13043 487 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 ORC1Q13415 861 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 NCOA4Q13772 614 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 HECTD3Q5T447 861 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 ACOT1Q86TX2 421 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 C12orf56Q8IXR9 622 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 KIAA1958Q8N8K9 716 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 HMGB4Q8WW32 186 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 PIGKQ92643 395 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 SDCBP2Q9H190 292 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 GMIPQ9P107 970 aa17.21■□□□□ 0.35
SNX2-205ENST00000506874 E2F8A0AVK6 867 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 GIPC1O14908 333 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 MAP3K13O43283 966 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 AP1G2O75843 785 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 EIF2DP41214 584 aaKnown RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 GRIA2P42262 883 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 SLC5A3P53794 718 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 GAD2Q05329 585 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 PAQR9Q6ZVX9 377 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 ARMCX6Q7L4S7 300 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 PGBD3Q8N328 593 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 FRMD1Q8N878 549 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 OVCA2Q8WZ82 227 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 WBP2Q969T9 261 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 SMARCD1Q96GM5 515 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 TNIP3Q96KP6 325 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 ZFRQ96KR1 1074 aaKnown RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 NACA2Q9H009 215 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 POLMQ9NP87 494 aaPredicted RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 DMAP1Q9NPF5 467 aaPredicted RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 KRT82Q9NSB4 513 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
SNX2-205ENST00000506874 ASCC3Q8N3C0 2202 aaKnown RBP17.2■□□□□ 0.34
SNX2-205ENST00000506874 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 TBC1D3BA6NDS4 549 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.19■□□□□ 0.34
SNX2-205ENST00000506874 TNFRSF10BO14763 440 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 VNN1O95497 513 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
SNX2-205ENST00000506874 CCDC130P13994 396 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 KIR2DL1P43626 348 aaPredicted RBP17.19■□□□□ 0.34
SNX2-205ENST00000506874 IRX4P78413 519 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 PNOCQ13519 176 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 ANO4Q32M45 955 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 EOGTQ5NDL2 527 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 BTBD8Q5XKL5 378 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 BBS7Q8IWZ6 715 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 TMEFF1Q8IYR6 380 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 FUKQ8N0W3 1084 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 OLIG1Q8TAK6 271 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 VRTNQ9H8Y1 702 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 TMEM9BQ9NQ34 198 aa17.19■□□□□ 0.34
SNX2-205ENST00000506874 TCRBV21S2A2A0A5A6 115 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 ADAM23O75077 832 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 RHOBTB3O94955 611 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 CHRM1P11229 460 aaPredicted RBP17.18■□□□□ 0.34
SNX2-205ENST00000506874 TNFRSF4P43489 277 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 PGFP49763 221 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 AP3M2P53677 418 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 DLG4P78352 724 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 UAP1L1Q3KQV9 507 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 HSF5Q4G112 596 aaPredicted RBP17.18■□□□□ 0.34
SNX2-205ENST00000506874 LPCAT2Q7L5N7 544 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 ZMIZ2Q8NF64 920 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 SLC2A14Q8TDB8 520 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 JAKMIP2Q96AA8 810 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 SPACA7Q96KW9 195 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 TIGD1Q96MW7 591 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 SMOQ99835 787 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNX2-205ENST00000506874 FAM49BQ9NUQ9 324 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 HMGXB4Q9UGU5 601 aa17.18■□□□□ 0.34
SNX2-205ENST00000506874 A0A0A0MRY4 1105 aa17.17■□□□□ 0.34
SNX2-205ENST00000506874 TRIM24O15164 1050 aa17.17■□□□□ 0.34
SNX2-205ENST00000506874 TULP3O75386 442 aa17.17■□□□□ 0.34
SNX2-205ENST00000506874 BEST1O76090 585 aa17.17■□□□□ 0.34
SNX2-205ENST00000506874 ADORA2BP29275 332 aa17.17■□□□□ 0.34
SNX2-205ENST00000506874 P2RY2P41231 377 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms