RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 GRB10Q13322 594 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 APOFQ13790 326 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SLC44A4Q53GD3 710 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RNF220Q5VTB9 566 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FKBP1CQ5VVH2 108 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RFPL4BQ6ZWI9 263 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RUFY3Q7L099 469 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ERO1BQ86YB8 467 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 UBASH3BQ8TF42 649 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 WDR60Q8WVS4 1066 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 IPCEF1Q8WWN9 437 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RAPGEF4Q8WZA2 1011 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RRP36Q96EU6 259 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MFSD14AQ96MC6 490 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TTC1Q99614 292 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PI4K2AQ9BTU6 479 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CLPBQ9H078 707 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CDH19Q9H159 772 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TAOK3Q9H2K8 898 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ARNT2Q9HBZ2 717 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHB16Q9NRJ7 776 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NOP53Q9NZM5 478 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SIRPGQ9P1W8 387 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 EIF2B4Q9UI10 523 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 DACH1Q9UI36 760 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TINAGQ9UJW2 476 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MAP3K2Q9Y2U5 619 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CHD9Q3L8U1 2897 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CFAP73A6NFT4 308 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 POTEMA6NI47 508 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC69A6NI79 296 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 A8MV72 311 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 USO1O60763 962 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 FLOT1O75955 427 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TJP3O95049 919 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CTDNEP1O95476 244 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SMIM18P0DKX4 95 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MARCKSP29966 332 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 ECHS1P30084 290 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 UBA7P41226 1012 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 ECE1P42892 770 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 PTDSS1P48651 473 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 HNRNPFP52597 415 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SRP54P61011 504 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 KRT76Q01546 638 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SLC14A2Q15849 920 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 FAM26FQ5R3K3 315 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 NSMFQ6X4W1 530 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MACC1Q6ZN28 852 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 RIOX2Q8IUF8 465 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 RNF168Q8IYW5 571 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SCYL3Q8IZE3 742 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 IL22RA1Q8N6P7 574 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 ANKRD53Q8N9V6 530 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 POP1Q99575 1024 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 VPS16Q9H269 839 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CATSPERZQ9NTU4 200 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 STK17AQ9UEE5 414 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHA6Q9UN73 950 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 ARIH2O95376 493 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CHGBP05060 677 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SERPINF2P08697 491 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 DRD4P21917 467 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MAOBP27338 520 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TKTP29401 623 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CD96P40200 585 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GARSP41250 739 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CDK7P50613 346 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SH3BGRP55822 239 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GSDMDP57764 484 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MYO1EQ12965 1108 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 EFR3AQ14156 821 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 NAA16Q6N069 864 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 LIAT1Q6ZQX7 453 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 DHX32Q7L7V1 743 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 RNF180Q86T96 592 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SGMS1Q86VZ5 419 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GALNT13Q8IUC8 556 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 DMRTC2Q8IXT2 367 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SP8Q8IXZ3 490 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM145Q8NBT3 493 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CATSPER2Q96P56 530 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM237Q96Q45 408 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MIPEPQ99797 713 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SHCBP1LQ9BZQ2 653 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 DNAJC25Q9H1X3 360 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 OBP2AQ9NY56 170 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SEPT10Q9P0V9 454 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 PIM2Q9P1W9 311 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TUBE1Q9UJT0 475 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SNX7Q9UNH6 387 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MYH4Q9Y623 1939 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 FNDC1Q4ZHG4 1894 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 A0A0U1RQJ8 604 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGA8KD6RF30 607 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGA8TH3BQL2 631 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MSCO60682 206 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 KIAA0754O94854 1291 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 FARP2O94887 1054 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms