RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 BZW1Q7L1Q6 419 aaKnown RBP18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 EPS8L3Q8TE67 593 aaKnown RBP18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 PIWIL1Q96J94 861 aaKnown RBP18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 SENP8Q96LD8 212 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 SNRNP25Q9BV90 132 aaKnown RBP18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZMYND15Q9H091 742 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 PAK5Q9P286 719 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 DSEQ9UL01 958 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 CDH9Q9ULB4 789 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 ATXN2Q99700 1313 aaKnown RBP18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 BCLAF3A2AJT9 711 aaKnown RBP18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 E7EVH7 732 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 TRAPPC3O43617 180 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 ASGR1P07306 291 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 FAM200BP0CF97 657 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 PECAM1P16284 738 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 CTCFP49711 727 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 ATP11AP98196 1134 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 PRKCZQ05513 592 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 HIF1AQ16665 826 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 CDO1Q16878 200 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 ANKRD20A8PQ5CZ79 823 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 CCSAPQ6IQ19 270 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 SCYL2Q6P3W7 929 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 OSTM1Q86WC4 334 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 CDKL3Q8IVW4 592 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 CFHR5Q9BXR6 569 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 GOLGA2P5Q9HBQ8 144 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 LRRC4Q9HBW1 653 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 SAYSD1Q9NPB0 183 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
TRAPPC11-204ENST00000505676 GMNCA6NCL1 334 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 GRAP2O75791 330 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 MLH1P40692 756 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 BCAR1P56945 870 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 SLC25A52Q3SY17 297 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 FUKQ8N0W3 1084 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 NAT8LQ8N9F0 302 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 CCDC134Q9H6E4 229 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 E7ESA3 106 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 GABBR2O75899 941 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 NOS2P35228 1153 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 KCNA10Q16322 511 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 DARS2Q6PI48 645 aaKnown RBP18■□□□□ 0.47
TRAPPC11-204ENST00000505676 RNF180Q86T96 592 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 PIGZQ86VD9 579 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 GSTCDQ8NEC7 633 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 SENP1Q9P0U3 644 aa18■□□□□ 0.47
TRAPPC11-204ENST00000505676 ARL5CA6NH57 179 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 PIK3R2O00459 728 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 CHADO15335 359 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZSCAN5DPP0CG00 497 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ODC1P11926 461 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 LCP1P13796 627 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ATP2A2P16615 1042 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 RPL22P35268 128 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 MRPS5P82675 430 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SP3Q02447 781 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 GRIK3Q13003 919 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 DSC3Q14574 896 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 TAF5Q15542 800 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 KCTD19Q17RG1 926 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SH3PXD2AQ5TCZ1 1133 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 WSCD1Q658N2 575 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 DSTYKQ6XUX3 929 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 NLRP14Q86W24 1093 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SIX6OS1Q8N1H7 587 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 PLD5Q8N7P1 536 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 GLIS1Q8NBF1 620 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZFP42Q96MM3 310 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SLC9A7Q96T83 725 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 GAD1Q99259 594 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 TRIM62Q9BVG3 475 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 DDX43Q9NXZ2 648 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 A0A0U1RQF3 1178 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 INPPL1O15357 1258 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 GNRH1P01148 92 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 THPOP40225 353 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZNF135P52742 658 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 METTL23Q86XA0 190 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 PDIK1LQ8N165 341 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ATP11CQ8NB49 1132 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 CPT1BQ92523 772 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SYT15Q9BQS2 421 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 ARHGAP39Q9C0H5 1083 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 TMEM51Q9NW97 253 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SLC24A2Q9UI40 661 aa17.99■□□□□ 0.47
TRAPPC11-204ENST00000505676 SF3B1O75533 1304 aaKnown RBP eCLIP17.99■□□□□ 0.476e-6■■■■■ 75.8
TRAPPC11-204ENST00000505676 SPAG6O75602 509 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 CTSHP09668 335 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 IL4RP24394 825 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 YWHAZP63104 245 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 RNASELQ05823 741 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZNF618Q5T7W0 954 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 CNPY4Q8N129 248 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 MYCBPAPQ8TBZ2 947 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 ARHGEF2Q92974 986 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 NT5C3BQ969T7 300 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 SLC2A13Q96QE2 648 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 XPO6Q96QU8 1125 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms