RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 CLIC4Q9Y696 253 aa17.94■□□□□ 0.46
DDR1-257ENST00000505534 ARHGAP33O14559 1287 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 ZBTB24O43167 697 aaPredicted RBP17.93■□□□□ 0.46
DDR1-257ENST00000505534 COCHO43405 550 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 TULP3O75386 442 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 CST3P01034 146 aaPredicted RBP17.93■□□□□ 0.46
DDR1-257ENST00000505534 NTSR1P30989 418 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
DDR1-257ENST00000505534 CACNA2D1P54289 1103 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 IFRD2Q12894 506 aaPredicted RBP17.93■□□□□ 0.46
DDR1-257ENST00000505534 HECTD3Q5T447 861 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 STXBP4Q6ZWJ1 553 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 MINDY1Q8N5J2 469 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 FBXO32Q969P5 355 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 ZFRQ96KR1 1074 aaKnown RBP17.93■□□□□ 0.46
DDR1-257ENST00000505534 CLIC6Q96NY7 704 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 ZNF518BQ9C0D4 1074 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 DNAAF2Q9NVR5 837 aaKnown RBP17.93■□□□□ 0.46
DDR1-257ENST00000505534 CALCOCO1Q9P1Z2 691 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 STARD13Q9Y3M8 1113 aa17.93■□□□□ 0.46
DDR1-257ENST00000505534 NBEAQ8NFP9 2946 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 PLXNB3Q9ULL4 1909 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 A0A1W2PQD8 194 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 TAF4O00268 1085 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 ZNF217O75362 1048 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 CAPNS1P04632 268 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 SYPP08247 313 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 CD59P13987 128 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 HOXB2P14652 356 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 TNNC1P63316 161 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 FAM193AP78312 1265 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 SLC14A1Q13336 389 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 C10orf76Q5T2E6 689 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 SNX30Q5VWJ9 437 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 RAB44Q7Z6P3 723 aaPredicted RBP17.92■□□□□ 0.46
DDR1-257ENST00000505534 CCDC65Q8IXS2 484 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 TERB1Q8NA31 727 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 B3GALNT2Q8NCR0 500 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 B3GNT5Q9BYG0 378 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 SPHK2Q9NRA0 654 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 HSPBP1Q9NZL4 362 aa17.92■□□□□ 0.46
DDR1-257ENST00000505534 CHORDC1Q9UHD1 332 aaPredicted RBP17.92■□□□□ 0.46
DDR1-257ENST00000505534 ACACAQ13085 2346 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 FREM2Q5SZK8 3169 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 IGHV1OR15-9A0A0B4J2B8 117 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 A0A1W2PQF6 199 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 A8MXQ7 604 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 CLDN5O00501 218 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 TNNI1P19237 187 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 PDCP20941 246 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 STAT6P42226 847 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 TUBP50607 506 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 ANO4Q32M45 955 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 WDR72Q3MJ13 1102 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 SDE2Q6IQ49 451 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 PROSER1Q86XN7 944 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 BBS7Q8IWZ6 715 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 DPEP3Q9H4B8 488 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 HCN2Q9UL51 889 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 LAMA5O15230 3695 aa17.91■□□□□ 0.46
DDR1-257ENST00000505534 TMEM25Q86YD3 366 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 SLC41A1Q8IVJ1 513 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 TRIML1Q8N9V2 468 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 FAM124BQ9H5Z6 455 aaPredicted RBP17.9■□□□□ 0.46
DDR1-257ENST00000505534 COMMD8Q9NX08 183 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 IL37Q9NZH6 218 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
DDR1-257ENST00000505534 STAU1O95793 577 aaKnown RBP17.89■□□□□ 0.45
DDR1-257ENST00000505534 DLATP10515 647 aaKnown RBP17.89■□□□□ 0.45
DDR1-257ENST00000505534 WASP42768 502 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 TRIP6Q15654 476 aaKnown RBP17.89■□□□□ 0.45
DDR1-257ENST00000505534 SNRNP35Q16560 246 aaKnown RBP17.89■□□□□ 0.45
DDR1-257ENST00000505534 GRAMD4Q6IC98 578 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 MIB1Q86YT6 1006 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 RDH13Q8NBN7 331 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 GLIS3Q8NEA6 775 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 OR2I1PQ8NGU4 316 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 SCAMP5Q8TAC9 235 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 IPO4Q8TEX9 1081 aaKnown RBP17.89■□□□□ 0.45
DDR1-257ENST00000505534 ZNF419Q96HQ0 510 aaPredicted RBP17.89■□□□□ 0.45
DDR1-257ENST00000505534 HSPA12BQ96MM6 686 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 KCNK16Q96T55 309 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 CGRRF1Q99675 332 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 CCSER2Q9H7U1 834 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 CD248Q9HCU0 757 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 SUSD2Q9UGT4 822 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 CYP8B1Q9UNU6 501 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 PCDHB9Q9Y5E1 797 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 PTPRBP23467 1997 aa17.89■□□□□ 0.45
DDR1-257ENST00000505534 VPS37CA5D8V6 355 aaPredicted RBP17.88■□□□□ 0.45
DDR1-257ENST00000505534 TRIM24O15164 1050 aa17.88■□□□□ 0.45
DDR1-257ENST00000505534 SH3BP5O60239 455 aa17.88■□□□□ 0.45
DDR1-257ENST00000505534 GJB3O75712 270 aa17.88■□□□□ 0.45
DDR1-257ENST00000505534 ZDHHC11BP0C7U3 371 aa17.88■□□□□ 0.45
DDR1-257ENST00000505534 NDUFV2P19404 249 aa17.88■□□□□ 0.45
DDR1-257ENST00000505534 ATICP31939 592 aa17.88■□□□□ 0.45
DDR1-257ENST00000505534 HOXD13P35453 343 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms