RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 SCFD1Q8WVM8 642 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 HMGB4Q8WW32 186 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 SLC22A12Q96S37 553 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 CAPN10Q9HC96 672 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 CRTAC1Q9NQ79 661 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 PCDHA7Q9UN72 937 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 LAMA5O15230 3695 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 C2orf78A6NCI8 922 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 SGK1O00141 431 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 EXOC3O60645 756 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 ABL1P00519 1130 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 SYPP08247 313 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 FTH1P19P0C7X4 201 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 PDIA4P13667 645 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 TCF3P15923 654 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 TIE1P35590 1138 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 GNL1P36915 607 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 IFRD2Q12894 506 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 SLC14A1Q13336 389 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 BIRC3Q13489 604 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 CUL4BQ13620 913 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 WDR72Q3MJ13 1102 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 FAM171BQ6P995 826 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 VSTM1Q6UX27 236 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 GRAMD1CQ8IYS0 662 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 IL17RCQ8NAC3 791 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 MRPL45Q9BRJ2 306 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 DNAAF2Q9NVR5 837 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 NXF1Q9UBU9 619 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 RAXQ9Y2V3 346 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 ACACAQ13085 2346 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 SHROOM3Q8TF72 1996 aa17.04■□□□□ 0.32
PDLIM7-213ENST00000505074 FLNBO75369 2602 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 TRIM66O15016 1216 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 SH3BP5O60239 455 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 HDCP19113 662 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 PDE6CP51160 858 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 SNRPFP62306 86 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 RPL6Q02878 288 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 DENND5BQ6ZUT9 1274 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 PNPLA1Q8N8W4 532 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 ADAM32Q8TC27 787 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 PCED1BQ96HM7 432 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 EXOC1Q9NV70 894 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 TRPM5Q9NZQ8 1165 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 GCNT4Q9P109 453 aa17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 APOBEC2Q9Y235 224 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 MYO18AQ92614 2054 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-213ENST00000505074 MYOFQ9NZM1 2061 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 TCRBV21S2A2A0A5A6 115 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 A8MXQ7 604 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 APODP05090 189 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 MYL6P60660 151 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 DNM1Q05193 864 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 ZNF33AQ06730 810 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 C19orf57Q0VDD7 668 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 MYCBPAPQ8TBZ2 947 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 SPATA17Q96L03 361 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 PNKPQ96T60 521 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 ARHGAP26Q9UNA1 814 aa17.02■□□□□ 0.32
PDLIM7-213ENST00000505074 SMG1Q96Q15 3661 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 PVALEFA0A1B0GWK0 134 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 F8VP50 259 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 TACC1O75410 805 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 KAT7O95251 611 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 CASP4P49662 377 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 USP46P62068 366 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 EHHADHQ08426 723 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 PKP1Q13835 747 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 ZNF699Q32M78 642 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 ATL3Q6DD88 541 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 SCARA5Q6ZMJ2 495 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 LIMS2Q7Z4I7 341 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 NAXDQ8IW45 347 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 MED10Q9BTT4 135 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 DPEP3Q9H4B8 488 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 ASH1LQ9NR48 2969 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 CACNA2D2Q9NY47 1150 aa17.01■□□□□ 0.31
PDLIM7-213ENST00000505074 HELZ2Q9BYK8 2649 aaKnown RBP17■□□□□ 0.31
PDLIM7-213ENST00000505074 CYP17A1P05093 508 aa17■□□□□ 0.31
PDLIM7-213ENST00000505074 PTPN1P18031 435 aaKnown RBP17■□□□□ 0.31
PDLIM7-213ENST00000505074 EIF2DP41214 584 aaKnown RBP17■□□□□ 0.31
PDLIM7-213ENST00000505074 SLC6A11P48066 632 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms