RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 CFAP97Q9P2B7 532 aa5.9□□□□□ -1.46
DEPDC1B-203ENST00000505017 NR2E3Q9Y5X4 410 aa5.9□□□□□ -1.46
DEPDC1B-203ENST00000505017 C5P01031 1676 aa5.9□□□□□ -1.47
DEPDC1B-203ENST00000505017 KCPQ6ZWJ8 1503 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 CICQ96RK0 1608 aaPredicted RBP5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 LINC01548A6NM66 108 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 HMMRO75330 724 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 ALDH1L1O75891 902 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 AHSGP02765 367 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZFXP17010 805 aaPredicted RBP5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 EIF2S2P20042 333 aaKnown RBP5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 CCT8P50990 548 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZNF134P52741 427 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 HK3P52790 923 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 KSR2Q6VAB6 950 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZNF66Q6ZN08 573 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 G2E3Q7L622 706 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 DNAAF4Q8WXU2 420 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 CNPPD1Q9BV87 410 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 ALG8Q9BVK2 526 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 MAN1C1Q9NR34 630 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 FLRT1Q9NZU1 646 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 PADI4Q9UM07 663 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 BCL9O00512 1426 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 BCL9LQ86UU0 1499 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 KAT6BQ8WYB5 2073 aa5.89□□□□□ -1.47
DEPDC1B-203ENST00000505017 TARM1B6A8C7 271 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 GCOM1H8Y6P7 765 aaPredicted RBP5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 DCLK1O15075 740 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 PPM1DO15297 605 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 TRIAP1O43715 76 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 TTLL1O95922 423 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 CHEK2O96017 543 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 IGHDP01880 384 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 GNAI2P04899 355 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 HNRNPCP07910 306 aaKnown RBP eCLIP5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 EBLN1P0CF75 366 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 SLC39A6Q13433 755 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 TBCCQ15814 346 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 TMEM119Q4V9L6 283 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 MAVSQ7Z434 540 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 HEATR3Q7Z4Q2 680 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 USP37Q86T82 979 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 ANKRD44Q8N8A2 993 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 KLHDC4Q8TBB5 520 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 SMG7Q92540 1137 aaKnown RBP5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 FAM136AQ96C01 138 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 WDR26Q9H7D7 661 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 EHD3Q9NZN3 535 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 ABCF2Q9UG63 623 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZNF831Q5JPB2 1677 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 THSD7AQ9UPZ6 1657 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 DOT1LQ8TEK3 1739 aa5.88□□□□□ -1.47
DEPDC1B-203ENST00000505017 PI4KAP2A4QPH2 592 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 TP73O15350 636 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 STARD3NLO95772 234 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 FTH1P19P0C7X4 201 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 SMARCA1P28370 1054 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 GCLCP48506 637 aaPredicted RBP5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 MAP2K6P52564 334 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 NEXNQ0ZGT2 675 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 BEND3Q5T5X7 828 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 VGLL2Q8N8G2 317 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 PI4KAP1Q8N8J0 262 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 LINS1Q8NG48 757 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 TNPO1Q92973 898 aaKnown RBP5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 ADCY9O60503 1353 aa5.87□□□□□ -1.47
DEPDC1B-203ENST00000505017 ATRNO75882 1429 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 COL15A1P39059 1388 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 UTYO14607 1347 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 TISP43B9A030 160 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 DNAJB5O75953 348 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 RPLP2P05387 115 aaKnown RBP5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 UBTFL1P0CB47 393 aaPredicted RBP5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 CD6P30203 668 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 HSPA1LP34931 641 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 LIPAP38571 399 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 NUCB1Q02818 461 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 EIF2B5Q13144 721 aaKnown RBP5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 LLGL1Q15334 1064 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 PROSER3Q2NL68 480 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 MEX3CQ5U5Q3 659 aaKnown RBP5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 CEP85Q6P2H3 762 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 USP45Q70EL2 814 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 CATIPQ7Z7H3 387 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 PIGBQ92521 554 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 MEIS3Q99687 375 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 DCTPP1Q9H773 170 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 GNL3LQ9NVN8 582 aaKnown RBP5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZDHHC8Q9ULC8 765 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 POLHQ9Y253 713 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 SSX2IPQ9Y2D8 614 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 USP16Q9Y5T5 823 aa5.86□□□□□ -1.47
DEPDC1B-203ENST00000505017 RAD54BQ9Y620 910 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms