RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 TAF5Q15542 800 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 VSTM1Q6UX27 236 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 CCHCR1Q8TD31 782 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 FAM172AQ8WUF8 416 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 SCLYQ96I15 445 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 CFAP57Q96MR6 1250 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 ZNF670Q9BS34 389 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 MARCH5Q9NX47 278 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 OGFRQ9NZT2 677 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 RCOR3Q9P2K3 495 aaPredicted RBP13.89□□□□□ -0.19
LMNA-220ENST00000504687 DNAJB4Q9UDY4 337 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 FAN1Q9Y2M0 1017 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■■■ 121.1
LMNA-220ENST00000504687 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
LMNA-220ENST00000504687 PIK3R2O00459 728 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 LIASO43766 372 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 DGKIO75912 1065 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 SASH3O75995 380 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 GAS8O95995 478 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 ITGAVP06756 1048 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 GALTP07902 379 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 CYP2C18P33260 490 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 TFDP2Q14188 446 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 CCDC142Q17RM4 750 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 C15orf59Q2T9L4 293 aaPredicted RBP13.88□□□□□ -0.19
LMNA-220ENST00000504687 PAN2Q504Q3 1202 aaKnown RBP13.88□□□□□ -0.19
LMNA-220ENST00000504687 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 ADAT2Q7Z6V5 191 aaKnown RBP13.88□□□□□ -0.19
LMNA-220ENST00000504687 LRRTM3Q86VH5 581 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 CCDC105Q8IYK2 499 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 KCTD6Q8NC69 237 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 SLC35B2Q8TB61 432 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 CLEC4CQ8WTT0 213 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 C2orf15Q8WU43 125 aaKnown RBP13.88□□□□□ -0.19
LMNA-220ENST00000504687 NTAN1Q96AB6 310 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 C8orf48Q96LL4 319 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 ACBD3Q9H3P7 528 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 ZDHHC18Q9NUE0 388 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 TMEM30AQ9NV96 361 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 WHRNQ9P202 907 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 NFU1Q9UMS0 254 aa13.88□□□□□ -0.19
LMNA-220ENST00000504687 CENPFP49454 3210 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 PI4K2BG5E9Z4 385 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 H7C4K7 107 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 APOC4-APOC2K7ER74 178 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 NDC80O14777 642 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 GRAP2O75791 330 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 ZBED1O96006 694 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 TIMP1P01033 207 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 APOC2P02655 101 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 HSPA9P38646 679 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 SLC11A1P49279 550 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 CCL23P55773 120 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 CAV1Q03135 178 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 DPYSL3Q14195 570 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 OASLQ15646 514 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 SH3PXD2AQ5TCZ1 1133 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 ZNF280DQ6N043 979 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 NECAB2Q7Z6G3 386 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 SPATA2LQ8IUW3 424 aaPredicted RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 DEFB106AQ8N104 65 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 BBOF1Q8ND07 529 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 DIS3LQ8TF46 1054 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 C1orf54Q8WWF1 131 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 ZNF689Q96CS4 500 aaPredicted RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 HEMGNQ9BXL5 484 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 ULBP1Q9BZM6 244 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 ZWILCHQ9H900 591 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 TMLHEQ9NVH6 421 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 COMMD8Q9NX08 183 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 IL37Q9NZH6 218 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 GRHL1Q9NZI5 618 aa13.87□□□□□ -0.19
LMNA-220ENST00000504687 R3HDM2Q9Y2K5 976 aaKnown RBP13.87□□□□□ -0.19
LMNA-220ENST00000504687 F8W810 466 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 DAPK3O43293 454 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 F9P00740 461 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 LTFP02788 710 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 FYNP06241 537 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 KRT10P13645 584 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 ITIH2P19823 946 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 TGM2P21980 687 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 BDNFP23560 247 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 IL4RP24394 825 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 IVDP26440 423 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms