RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 HSF2BPO75031 334 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 ENDOD1O94919 500 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 FBXO21O94952 628 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 SLU7O95391 586 aaKnown RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 SEC24AO95486 1093 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 IGLV3-25P01717 112 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 GLI1P08151 1106 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 USP17L7P0C7H9 530 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 CTSAP10619 480 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 PYGMP11217 842 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 ARSEP51690 589 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 ZNF211Q13398 564 aaPredicted RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 TUBB2AQ13885 445 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 CAMK1Q14012 370 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 SHHQ15465 462 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 TAZQ16635 292 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 DDR2Q16832 855 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 ARTNQ5T4W7 220 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 LRRC38Q5VT99 294 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 SYPL2Q5VXT5 272 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 CC2D1AQ6P1N0 951 aaPredicted RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 KATNAL2Q8IYT4 538 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 DEFB106AQ8N104 65 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 VPS52Q8N1B4 723 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 NOA1Q8NC60 698 aaKnown RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 ACTRT1Q8TDG2 376 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 C2orf15Q8WU43 125 aaKnown RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 UBE2Q2Q8WVN8 375 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 PBKQ96KB5 322 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 NPY6RQ99463 290 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 GDF15Q99988 308 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 TUBB2BQ9BVA1 445 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 NMUR1Q9HB89 426 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 LRRC4Q9HBW1 653 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 OSER1Q9NX31 292 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 LCMT1Q9UIC8 334 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 YBX2Q9Y2T7 364 aaKnown RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 NR2E1Q9Y466 385 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 DENND4CQ5VZ89 1909 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 MTCL1Q9Y4B5 1905 aaKnown RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 TCRBV7S2A1N4TA0A589 114 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 I6L893 689 aaPredicted RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 FSCN2O14926 492 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 TLL1O43897 1013 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 TRUB2O95900 331 aaKnown RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 ZBED1O96006 694 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 CPB1P15086 417 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 PDGFRAP16234 1089 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 MIPP30301 263 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 OR1D2P34982 312 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 PCK1P35558 622 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 BMPR1AP36894 532 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 MATKP42679 507 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 ITIH3Q06033 890 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 SMARCB1Q12824 385 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 RAB33AQ14088 237 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 NAA30Q147X3 362 aaPredicted RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 EFHC1Q5JVL4 640 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 SPOUT1Q5T280 376 aaKnown RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 BEND5Q7L4P6 421 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 POLNQ7Z5Q5 900 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 SIX6OS1Q8N1H7 587 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 FAM71BQ8TC56 605 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 ACSF2Q96CM8 615 aaPredicted RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 SPATA17Q96L03 361 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 RNPC3Q96LT9 517 aaKnown RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 TBCBQ99426 244 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 C17orf80Q9BSJ5 609 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
TPM3-217ENST00000504663 USTQ9Y2C2 406 aa10.88□□□□□ -0.67
TPM3-217ENST00000504663 CCDC85CA6NKD9 419 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 C2CD2LO14523 706 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 TEX28O15482 410 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 LTFP02788 710 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 URODP06132 367 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 ZDHHC11BP0C7U3 371 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 PTPN7P35236 360 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 GRIK1P39086 918 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 ARPP19P56211 112 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 SLC8A3P57103 927 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 SNX16P57768 344 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 RNASE9P60153 205 aaKnown RBP10.87□□□□□ -0.67
TPM3-217ENST00000504663 ERVFC1P60507 584 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 YWHAZP63104 245 aaKnown RBP10.87□□□□□ -0.67
TPM3-217ENST00000504663 ADCY2Q08462 1091 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 DUSP4Q13115 394 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 KLF1Q13351 362 aaPredicted RBP10.87□□□□□ -0.67
TPM3-217ENST00000504663 MTMR3Q13615 1198 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 ACAP1Q15027 740 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 CA9Q16790 459 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 STRADAQ7RTN6 431 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 RHOT1Q8IXI2 618 aa10.87□□□□□ -0.67
TPM3-217ENST00000504663 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms