RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IARS2Q9NSE4 1012 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 NMRK1Q9NWW6 199 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 PIK3CDO00329 1044 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 HOXA2O43364 376 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 MAP3K6O95382 1288 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 AVPR1AP37288 418 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 P3H2Q8IVL5 708 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 ALBP02768 609 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 THP07101 528 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 SOX11P35716 441 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 RPL10AP62906 217 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 ACBD5Q5T8D3 534 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 TMEM169Q96HH4 297 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 HES6Q96HZ4 224 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 PAWRQ96IZ0 340 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 VCPIP1Q96JH7 1222 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 ADARB2Q9NS39 739 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 H2AFY2Q9P0M6 372 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 ASS1P00966 412 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 RBP1P09455 135 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 HNRNPH1P31943 449 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 TBC1D23Q9NUY8 699 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 SHOC2Q9UQ13 582 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 SKAP2O75563 359 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 HPCAP84074 193 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 RUNX1T1Q06455 604 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 FAM131BQ86XD5 332 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 PNMA5Q96PV4 448 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
PCDHA1-203ENST00000504120 WDR47O94967 919 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 GLI1P08151 1106 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 MZF1P28698 734 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SOAT1P35610 550 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 RARRES1P49788 294 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 OXCT1P55809 520 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 DSG1Q02413 1049 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 GCNT1Q02742 428 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 EZH2Q15910 746 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SEL1L3Q68CR1 1132 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 STRA8Q7Z7C7 330 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 MIB1Q86YT6 1006 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 FAM9CQ8IZT9 166 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 INPP5DQ92835 1189 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 DTNAQ9Y4J8 743 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 CALB2P22676 271 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 YY1P25490 414 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SDE2Q6IQ49 451 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 TBCBQ99426 244 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 CHST12Q9NRB3 414 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 HAO1Q9UJM8 370 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 A0A087WZ62 844 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 VPS50Q96JG6 964 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 FDXACB1Q9BRP7 624 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 THUMPD3Q9BV44 507 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SPASTQ9UBP0 616 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 ACOT9Q9Y305 439 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 UBTFL6P0CB48 400 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 TMEM132BQ14DG7 1078 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 EMC1Q8N766 993 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 ACTL9Q8TC94 416 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 MTMR8Q96EF0 704 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 ANKZF1Q9H8Y5 726 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 BARX2Q9UMQ3 279 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 MAGEB16A2A368 324 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 CRTAMO95727 393 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 ARL4DP49703 201 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 RCN1Q15293 331 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 SYTL2Q9HCH5 934 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 PDP2Q9P2J9 529 aa17.05■□□□□ 0.32
PCDHA1-203ENST00000504120 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 KANSL1LA0AUZ9 987 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 M0R3G1 203 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 AP5Z1O43299 807 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 HNRNPCP07910 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 MAPK1P28482 360 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 SCTRP47872 440 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 MAP3K7CLP57077 242 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 PHF21AQ96BD5 680 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 DCLK3Q9C098 648 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 DDX28Q9NUL7 540 aaKnown RBP17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 SLITRK3O94933 977 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 CXCL8P10145 99 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 DSG3P32926 999 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 SERPINB5P36952 375 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 MGAT5Q09328 741 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 ZNF268Q14587 947 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 ZDHHC17Q8IUH5 632 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 TATDN2Q93075 761 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 SHCBP1LQ9BZQ2 653 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 UBXN6Q9BZV1 441 aa17.04■□□□□ 0.32
PCDHA1-203ENST00000504120 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms