RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ATXN1P54253 815 aaKnown RBP23.45■■□□□ 1.34
PCDH1-204ENST00000503492 MRPS6P82932 125 aaKnown RBP23.45■■□□□ 1.34
PCDH1-204ENST00000503492 LRRC14Q15048 493 aa23.45■■□□□ 1.34
PCDH1-204ENST00000503492 TMED2Q15363 201 aa23.45■■□□□ 1.34
PCDH1-204ENST00000503492 CENPIQ92674 756 aaPredicted RBP23.45■■□□□ 1.34
PCDH1-204ENST00000503492 PPP1R10Q96QC0 940 aaKnown RBP23.45■■□□□ 1.34
PCDH1-204ENST00000503492 KCNK9Q9NPC2 374 aa23.45■■□□□ 1.34
PCDH1-204ENST00000503492 CDY2AQ9Y6F7 541 aa23.45■■□□□ 1.34
PCDH1-204ENST00000503492 MEIS3P2A8K0S8 358 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 WARSP23381 471 aaKnown RBP23.44■■□□□ 1.34
PCDH1-204ENST00000503492 LRPAP1P30533 357 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 ARL4CP56559 192 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 GPX6P59796 221 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 SLC9A4Q6AI14 798 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 SRRM1Q8IYB3 904 aaKnown RBP23.44■■□□□ 1.34
PCDH1-204ENST00000503492 LRRC34Q8IZ02 419 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 WDR83Q9BRX9 315 aaKnown RBP23.44■■□□□ 1.34
PCDH1-204ENST00000503492 PHACTR1Q9C0D0 580 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 CYLDQ9NQC7 956 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 CLUHO75153 1309 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 H7C0C1 242 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 APOL1O14791 398 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 ATP2C2O75185 946 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 SLC10A3P09131 477 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 DESP17661 470 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 SCNN1AP37088 669 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 ATP5OP48047 213 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 BASP1P80723 227 aaKnown RBP23.44■■□□□ 1.34
PCDH1-204ENST00000503492 IFT88Q13099 833 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 GNASQ5JWF2 1037 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 FAM182AQ5T1J6 154 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 TDRPQ86YL5 185 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 TOP6BLQ8N6T0 577 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 B3GALNT2Q8NCR0 500 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 TNIP3Q96KP6 325 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 NCAPGQ9BPX3 1015 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 USP29Q9HBJ7 922 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 UBN1Q9NPG3 1134 aa23.44■■□□□ 1.34
PCDH1-204ENST00000503492 XPO7Q9UIA9 1087 aaKnown RBP23.44■■□□□ 1.34
PCDH1-204ENST00000503492 POC1B-GALNT4F8VUJ3 575 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 ACADSBP45954 432 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 GKAP1Q5VSY0 366 aaPredicted RBP23.43■■□□□ 1.34
PCDH1-204ENST00000503492 CXCL17Q6UXB2 119 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 ARCQ7LC44 396 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 TADA2BQ86TJ2 420 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 ANKRD42Q8N9B4 389 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 WNT8BQ93098 351 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 HSFY1Q96LI6 401 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 CACNG4Q9UBN1 327 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 ZMYND8Q9ULU4 1186 aaPredicted RBP23.43■■□□□ 1.34
PCDH1-204ENST00000503492 E7ESA3 106 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 TGM2P21980 687 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 RDXP35241 583 aaKnown RBP23.43■■□□□ 1.34
PCDH1-204ENST00000503492 BCAR1P56945 870 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 INHBEP58166 350 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 NBPF20Q3BBV1 942 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 VSIG1Q86XK7 387 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 CACNA2D3Q8IZS8 1091 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 FAF2Q96CS3 445 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 ZNF670Q9BS34 389 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 MTG1Q9BT17 334 aaPredicted RBP23.43■■□□□ 1.34
PCDH1-204ENST00000503492 MAGEB5Q9BZ81 275 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 GTF2IRD1Q9UHL9 959 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 HEY1Q9Y5J3 304 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 ACTL7BQ9Y614 415 aa23.43■■□□□ 1.34
PCDH1-204ENST00000503492 KIAA0754O94854 1291 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 GJA9P57773 515 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 PPP6R3Q5H9R7 873 aaPredicted RBP23.42■■□□□ 1.34
PCDH1-204ENST00000503492 GDF6Q6KF10 455 aaPredicted RBP23.42■■□□□ 1.34
PCDH1-204ENST00000503492 YTHDF3Q7Z739 585 aaKnown RBP23.42■■□□□ 1.34
PCDH1-204ENST00000503492 FUKQ8N0W3 1084 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 MLXIPLQ9NP71 852 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 ST3GAL5Q9UNP4 418 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 TRPV2Q9Y5S1 764 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.42■■□□□ 1.34
PCDH1-204ENST00000503492 RASA4BC9J798 803 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 CYB561D2O14569 222 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 RASA4O43374 803 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 ACAT1P24752 427 aaKnown RBP23.42■■□□□ 1.34
PCDH1-204ENST00000503492 L1CAMP32004 1257 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 MTM1Q13496 603 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 WSCD1Q658N2 575 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 PIGZQ86VD9 579 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 PYROXD1Q8WU10 500 aa23.42■■□□□ 1.34
PCDH1-204ENST00000503492 HNRNPABQ99729 332 aaKnown RBP23.42■■□□□ 1.34
PCDH1-204ENST00000503492 SCN10AQ9Y5Y9 1956 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 M0QZ92 97 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 SMAPO00193 183 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 CLDN5O00501 218 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 XPO1O14980 1071 aaKnown RBP23.41■■□□□ 1.34
PCDH1-204ENST00000503492 KPNA6O60684 536 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 MAP3K6O95382 1288 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 PGK1P00558 417 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 CYBAP13498 195 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 MAGEA9P43362 315 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 ADCY1Q08828 1119 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 DPYSL2Q16555 572 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 GSTCDQ8NEC7 633 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 DYDC1Q8WWB3 177 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 DNAI2Q9GZS0 605 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms