RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 STK33Q9BYT3 514 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 ULBP1Q9BZM6 244 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 HEBP1Q9NRV9 189 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 CLIC5Q9NZA1 410 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 DENND4CQ5VZ89 1909 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 LEFTY2O00292 366 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 ZBED1O96006 694 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 PNMA6AP0CW24 399 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 MBL2P11226 248 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 GLULP15104 373 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 CLCN1P35523 988 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 GPD2P43304 727 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 RPL34P49207 117 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 MLLT6P55198 1093 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 PTK2Q05397 1052 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 ADIGQ0VDE8 80 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 PDGFRLQ15198 375 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 SYCP1Q15431 976 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 CWF19L1Q69YN2 538 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 CC2D1AQ6P1N0 951 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 KLHDC10Q6PID8 442 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 DDX42Q86XP3 938 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 SUGP1Q8IWZ8 645 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 ARHGAP18Q8N392 663 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 CSGALNACT1Q8TDX6 532 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 ZFRQ96KR1 1074 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 TBC1D17Q9HA65 648 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 CNGB3Q9NQW8 809 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 GKN1Q9NS71 199 aa19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 FAM207AQ9NSI2 230 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM7-209ENST00000503346 F8VZ95 297 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 GABBR2O75899 941 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 RARGP13631 454 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 CLCN5P51795 746 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 BPIFB4P59827 614 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 TPRG1Q6ZUI0 275 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 BHLHA9Q7RTU4 235 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 SIX6OS1Q8N1H7 587 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 FLCNQ8NFG4 579 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 STK32AQ8WU08 396 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 OSCP1Q8WVF1 389 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 MSANTD3Q96H12 275 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 SMPD4Q9NXE4 827 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 NAGPAQ9UK23 515 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 PCDHGC3Q9UN70 934 aa19.16■□□□□ 0.66
PDLIM7-209ENST00000503346 ANAPC1Q9H1A4 1944 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 SHISA7A6NL88 538 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 EPHB6O15197 1021 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 TBX18O95935 607 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 RALAP11233 206 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 ATP5C1P36542 298 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 RGS7P49802 495 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 ASTLQ6HA08 431 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 TADA2BQ86TJ2 420 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 LUZP1Q86V48 1076 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 SLC47A2Q86VL8 602 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 CDK5RAP1Q96SZ6 601 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 NACA2Q9H009 215 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 C8orf33Q9H7E9 229 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 RTN4Q9NQC3 1192 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 HPS4Q9NQG7 708 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 PIAS3Q9Y6X2 628 aa19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 ZNF638Q14966 1978 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-209ENST00000503346 KANSL1LA0AUZ9 987 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 MAN2B1O00754 1011 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 LCP1P13796 627 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 AOC1P19801 751 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 ACADSBP45954 432 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 VCPP55072 806 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 JAM2P57087 298 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 DAOAP59103 153 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 POLR2FP61218 127 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 YWHAGP61981 247 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 TPM4P67936 248 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 TNK2Q07912 1038 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 FILIP1LQ4L180 1135 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 TRIM68Q6AZZ1 485 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 ZNF852Q6ZMS4 543 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 NEK11Q8NG66 645 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 IRGQQ8WZA9 623 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 NDRG1Q92597 394 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 PCMTD1Q96MG8 357 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 SLC4A5Q9BY07 1137 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 LHX5Q9H2C1 402 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 EBF3Q9H4W6 596 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 DUS2Q9NX74 493 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 GTSE1Q9NYZ3 720 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 CFAP97Q9P2B7 532 aa19.14■□□□□ 0.65
PDLIM7-209ENST00000503346 A0A1B0GTH6 734 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 E2F8A0AVK6 867 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 TEX33O43247 280 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 FBXO21O94952 628 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 CYP11B1P15538 503 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 AVPR2P30518 371 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 IFNAR2P48551 515 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 KPNA1P52294 538 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 RUNX3Q13761 415 aa19.13■□□□□ 0.65
PDLIM7-209ENST00000503346 EML3Q32P44 896 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms