RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 KCNE1P15382 129 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CA4P22748 312 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 HADHAP40939 763 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF200P98182 395 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TRIP13Q15645 432 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 GET4Q7L5D6 327 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 RAB3IL1Q8TBN0 382 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CKAP2Q8WWK9 683 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MAML3Q96JK9 1138 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MTG1Q9BT17 334 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 KLC4Q9NSK0 619 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 GDAP2Q9NXN4 497 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 PTCH2Q9Y6C5 1203 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MAGEB16A2A368 324 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 KLHL33A6NCF5 533 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 LMNAP02545 664 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MYL3P08590 195 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 AKR1A1P14550 325 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 KLRC2P26717 231 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 HOXD10P28358 340 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MIPP30301 263 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SKIV2L2P42285 1042 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 KPNA2P52292 529 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TAS2R40P59535 323 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 YWHAGP61981 247 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 BBS9Q3SYG4 887 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 PPP1R15BQ5SWA1 713 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 NUGGCQ68CJ6 796 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 OLFML1Q6UWY5 402 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SLC26A9Q7LBE3 791 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TMEM110Q86TL2 294 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ANKRD42Q8N9B4 389 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ZSWIM2Q8NEG5 633 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 PPP1R14CQ8TAE6 165 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 RNF157Q96PX1 679 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 XPO7Q9UIA9 1087 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 RPL26L1Q9UNX3 145 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 HGSO14964 777 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CABYRO75952 493 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 NFICP08651 508 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 RFC1P35251 1148 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CCNHP51946 323 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CCDC15Q0P6D6 951 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TBCCQ15814 346 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 EEF1DP3Q658K8 133 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TAPT1Q6NXT6 567 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 LRRC49Q8IUZ0 686 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 NLGN2Q8NFZ4 835 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ANKRD27Q96NW4 1050 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TGS1Q96RS0 853 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SLC4A5Q9BY07 1137 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 NEUROG2Q9H2A3 272 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 DNPEPQ9ULA0 475 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 NAALADL1Q9UQQ1 740 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 PIN4Q9Y237 131 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SF3B1O75533 1304 aaKnown RBP eCLIP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 KPNA7A9QM74 516 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 F8VP50 259 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 GPR25O00155 361 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 DNAJC8O75937 253 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 SNRPAP09012 282 aaKnown RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 GPD2P43304 727 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 SLCO1A2P46721 670 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 IFRD2Q12894 506 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 NOMO1Q15155 1222 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 SLC10A6Q3KNW5 377 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 PTPN20Q4JDL3 420 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 TWF2Q6IBS0 349 aaKnown RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 TRPM8Q7Z2W7 1104 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 SRRM1Q8IYB3 904 aaKnown RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 ARHGAP18Q8N392 663 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 SNX27Q96L92 541 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 TRIM55Q9BYV6 548 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 FAM49AQ9H0Q0 323 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 VPS11Q9H270 941 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 STARD13Q9Y3M8 1113 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 GRIN2DO15399 1336 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 PI4K2BG5E9Z4 385 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 XPO1O14980 1071 aaKnown RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 OPHN1O60890 802 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 NOS2P35228 1153 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 TAF1CQ15572 869 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 LONRF1Q17RB8 773 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 THEMIS2Q5TEJ8 643 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 ANKRD20A3Q5VUR7 823 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 DSTYKQ6XUX3 929 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 C3orf62Q6ZUJ4 267 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 OLIG1Q8TAK6 271 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 NSMCE1Q8WV22 266 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 APBA2Q99767 749 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 EPAS1Q99814 870 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 RNPEPQ9H4A4 650 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.69□□□□□ -1.18
PDGFC-203ENST00000502773 PCSK1NQ9UHG2 260 aa7.69□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF180Q9UJW8 692 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms