RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 N4BP2L1Q5TBK1 243 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 ADGRG2Q8IZP9 1017 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 LINC00301Q8NCQ3 95 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 GOLGA5Q8TBA6 731 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 USP33Q8TEY7 942 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 PNKPQ96T60 521 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 CGRRF1Q99675 332 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 LSM14BQ9BX40 385 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 FGFBP2Q9BYJ0 223 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 POLMQ9NP87 494 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 AGPAT3Q9NRZ7 376 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 DENND4CQ5VZ89 1909 aa11.84□□□□□ -0.51
UBE2D3-211ENST00000502404 A0A087X0B3 334 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 TM4SF5O14894 197 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 HCRTO43612 131 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CLSTN1O94985 981 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 STAU1O95793 577 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 YWHAQP27348 245 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 HOXC13P31276 330 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 DPP6P42658 865 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CYP2J2P51589 502 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 AP3M2P53677 418 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 SEC13P55735 322 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CYP24A1Q07973 514 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 TAF10Q12962 218 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 EOGTQ5NDL2 527 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 BTBD8Q5XKL5 378 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 FILIP1Q7Z7B0 1213 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 SNIP1Q8TAD8 396 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 DHX58Q96C10 678 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 OTUB2Q96DC9 234 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 TNIP3Q96KP6 325 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 SPACA7Q96KW9 195 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CALR3Q96L12 384 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CNOT6LQ96LI5 555 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 C7orf25Q9BPX7 421 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 CPQQ9Y646 472 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 PTPRJQ12913 1337 aa11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 KIF26AQ9ULI4 1882 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-211ENST00000502404 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 E2F8A0AVK6 867 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 K7EQS6 105 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 KCNK5O95279 499 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 YEATS4O95619 227 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 CST3P01034 146 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 P4HA1P13674 534 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 PMLP29590 882 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 OPRD1P41143 372 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 GRIA2P42262 883 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 TNFRSF4P43489 277 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 SHC2P98077 582 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 DHCR24Q15392 516 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 CRY1Q16526 586 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 NAIF1Q69YI7 327 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 SCARA3Q6AZY7 606 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 LPCAT2Q7L5N7 544 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 EPM2AIP1Q7L775 607 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 VASH1Q7L8A9 365 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 CYP2U1Q7Z449 544 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 TRMT11Q7Z4G4 463 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 RASSF3Q86WH2 238 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 TTC30AQ86WT1 665 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 B3GALNT2Q8NCR0 500 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 FAM84AQ96KN4 292 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 MRPL45Q9BRJ2 306 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 MED10Q9BTT4 135 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 RNF38Q9H0F5 515 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 POLR3BQ9NW08 1133 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 COMMD8Q9NX08 183 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 SMPD4Q9NXE4 827 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 FAM13BQ9NYF5 915 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 CFAP97Q9P2B7 532 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 NXF1Q9UBU9 619 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 GREB1Q4ZG55 1949 aa11.82□□□□□ -0.52
UBE2D3-211ENST00000502404 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 DCLK1O15075 740 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 CLIC2O15247 247 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 TGFB1I1O43294 461 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 EXOC3O60645 756 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 KRT37O76014 449 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 KAT7O95251 611 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 OLFM2O95897 454 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 OAS1P00973 400 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 CYP17A1P05093 508 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 ADH5P11766 374 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 GAD2Q05329 585 aa11.81□□□□□ -0.52
UBE2D3-211ENST00000502404 LMAN2Q12907 356 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms