RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 PPP1R12AO14974 1030 aaPredicted RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 P4HA2O15460 535 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 XPOTO43592 962 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 N4BP1O75113 896 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 DDHD2O94830 711 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 VNN1O95497 513 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ITGB1P05556 798 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 TMEM191BP0C7N4 346 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 LAG3P18627 525 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 CYP3A5P20815 502 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PBX1P40424 430 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SLC11A1P49279 550 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 FMO5P49326 533 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 VAMP7P51809 220 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 GUCY2FP51841 1108 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 CLCQ05315 142 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PPP3CAQ08209 521 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ADAM9Q13443 819 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 KCNJ12Q14500 433 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 KRT31Q15323 416 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SURF1Q15526 300 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PLEKHG6Q3KR16 790 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 CCDC40Q4G0X9 1142 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PAN2Q504Q3 1202 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 FBXW10Q5XX13 1052 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SARM1Q6SZW1 724 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 CD300LGQ6UXG3 332 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SPRED2Q7Z698 418 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 MCATQ8IVS2 390 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SLITRK4Q8IW52 837 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 FAM114A1Q8IWE2 563 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 COLGALT2Q8IYK4 626 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PHACTR4Q8IZ21 702 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SLC39A11Q8N1S5 342 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 LRRC52Q8N7C0 313 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 FAM181AQ8N9Y4 354 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 MFSD2AQ8NA29 543 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 RNF169Q8NCN4 708 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 URGCPQ8TCY9 931 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ATXN2LQ8WWM7 1075 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 C18orf25Q96B23 403 aaPredicted RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ANKRD36BP1Q96IX9 119 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ZNF560Q96MR9 790 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 UROC1Q96N76 676 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ACAP3Q96P50 834 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 FNBP1Q96RU3 617 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 YME1L1Q96TA2 773 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PAAF1Q9BRP4 392 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 TMEM175Q9BSA9 504 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 TCHPQ9BT92 498 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SRRTQ9BXP5 876 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 NAT10Q9H0A0 1025 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 XYLT2Q9H1B5 865 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 IRF2BPLQ9H1B7 796 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 GANQ9H2C0 597 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 NRDE2Q9H7Z3 1164 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SLC38A7Q9NVC3 462 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 FANCLQ9NW38 375 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 MIOSQ9NXC5 875 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 TAB2Q9NYJ8 693 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 GCNT4Q9P109 453 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 DNAJB4Q9UDY4 337 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PRKAG3Q9UGI9 489 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ARMCX3Q9UH62 379 aaPredicted RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 LIMA1Q9UHB6 759 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 ITGA11Q9UKX5 1188 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SIK3Q9Y2K2 1263 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 YBX2Q9Y2T7 364 aaKnown RBP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 COQ4Q9Y3A0 265 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 MSRB2Q9Y3D2 182 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PCDHA11Q9Y5I1 949 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SLC4A7Q9Y6M7 1214 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 PLXNA3P51805 1871 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 DENND4AQ7Z401 1863 aa4.34□□□□□ -1.71
CTPS1-212ENST00000498694 SF3B1O75533 1304 aaKnown RBP eCLIP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 ITIH6Q6UXX5 1313 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 SMTNL1A8MU46 457 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 BECN2A8MW95 431 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 CHURC1-FNTBB4DL54 471 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 PIRO00625 290 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 AP5Z1O43299 807 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 ZC3H11AO75152 810 aaKnown RBP eCLIP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 SLITRK5O94991 958 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 FGFR1OPO95684 399 aaKnown RBP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 ASS1P00966 412 aaKnown RBP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 POMCP01189 267 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 HLA-DRAP01903 254 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 AFPP02771 609 aaKnown RBP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 C4BPAP04003 597 aaKnown RBP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 ITGB3P05106 788 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 THP07101 528 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 CA3P07451 260 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 DLATP10515 647 aaKnown RBP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 KRT13P13646 458 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 FOSL2P15408 326 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 ITIH2P19823 946 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 POLR2BP30876 1174 aaKnown RBP4.33□□□□□ -1.72
CTPS1-212ENST00000498694 GTF2H1P32780 548 aa4.33□□□□□ -1.72
CTPS1-212ENST00000498694 PPM1AP35813 382 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms