RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 A0A1W2PQF6 199 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 ZNF233A6NK53 670 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 COCHO43405 550 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 NDUFS2O75306 463 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 FTH1P19P0C7X4 201 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 PTPN1P18031 435 aaKnown RBP14.81□□□□□ -0.04
CCDC58-207ENST00000498466 NDUFV2P19404 249 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 SURF1Q15526 300 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 COL28A1Q2UY09 1125 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 HECTD3Q5T447 861 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 RRAGBQ5VZM2 374 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 SDE2Q6IQ49 451 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 MIB1Q86YT6 1006 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 NAXDQ8IW45 347 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 BBS7Q8IWZ6 715 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 CHPFQ8IZ52 775 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 NUP93Q8N1F7 819 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 PDZD8Q8NEN9 1154 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 ADAMTS14Q8WXS8 1223 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 ZFRQ96KR1 1074 aaKnown RBP14.81□□□□□ -0.04
CCDC58-207ENST00000498466 FGFBP2Q9BYJ0 223 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 ZNF518BQ9C0D4 1074 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 DPEP3Q9H4B8 488 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 FAM124BQ9H5Z6 455 aaPredicted RBP14.81□□□□□ -0.04
CCDC58-207ENST00000498466 SPHK2Q9NRA0 654 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 TMEM30AQ9NV96 361 aa14.81□□□□□ -0.04
CCDC58-207ENST00000498466 ADAMTS9Q9P2N4 1935 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 PLXND1Q9Y4D7 1925 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 PCNX2A6NKB5 2137 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 CLDN5O00501 218 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 KIAA0391O15091 583 aaKnown RBP14.8□□□□□ -0.04
CCDC58-207ENST00000498466 TRIM24O15164 1050 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 RTN3O95197 1032 aaPredicted RBP14.8□□□□□ -0.04
CCDC58-207ENST00000498466 NEFLP07196 543 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 IRF1P10914 325 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 GNSP15586 552 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 TXLNAP40222 546 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 SOWAHCQ53LP3 525 aaPredicted RBP14.8□□□□□ -0.04
CCDC58-207ENST00000498466 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 EGFLAMQ63HQ2 1017 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 TMEM25Q86YD3 366 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 CBWD2Q8IUF1 395 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 WDR49Q8IV35 697 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 IPO4Q8TEX9 1081 aaKnown RBP14.8□□□□□ -0.04
CCDC58-207ENST00000498466 OVCA2Q8WZ82 227 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 TMX3Q96JJ7 454 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 NACA2Q9H009 215 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
CCDC58-207ENST00000498466 SUSD2Q9UGT4 822 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 CHORDC1Q9UHD1 332 aaPredicted RBP14.8□□□□□ -0.04
CCDC58-207ENST00000498466 HCN2Q9UL51 889 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 STARD13Q9Y3M8 1113 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 NME7Q9Y5B8 376 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 PCDH15Q96QU1 1955 aa14.8□□□□□ -0.04
CCDC58-207ENST00000498466 A8MXQ7 604 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 TACC1O75410 805 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 GJB3O75712 270 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 TNNC1P63316 161 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 LARP1BQ659C4 914 aaKnown RBP14.79□□□□□ -0.04
CCDC58-207ENST00000498466 GRAMD4Q6IC98 578 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 CCNI2Q6ZMN8 369 aaPredicted RBP14.79□□□□□ -0.04
CCDC58-207ENST00000498466 TRAPPC11Q7Z392 1133 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 BRAPQ7Z569 592 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 B3GALNT2Q8NCR0 500 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 SCFD1Q8WVM8 642 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 ZNF419Q96HQ0 510 aaPredicted RBP14.79□□□□□ -0.04
CCDC58-207ENST00000498466 ACOX2Q99424 681 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 B3GNT5Q9BYG0 378 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 PANK4Q9NVE7 773 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
CCDC58-207ENST00000498466 APOBEC2Q9Y235 224 aaKnown RBP14.79□□□□□ -0.04
CCDC58-207ENST00000498466 CST3P01034 146 aaPredicted RBP14.78□□□□□ -0.04
CCDC58-207ENST00000498466 DLATP10515 647 aaKnown RBP14.78□□□□□ -0.04
CCDC58-207ENST00000498466 TNNI1P19237 187 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 MAOBP27338 520 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 GRIK2Q13002 908 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 WDR72Q3MJ13 1102 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 WDR45BQ5MNZ6 344 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 KIAA1324Q6UXG2 1013 aaKnown RBP14.78□□□□□ -0.04
CCDC58-207ENST00000498466 SCAMP5Q8TAC9 235 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 MDM1Q8TC05 714 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 HNRNPLLQ8WVV9 542 aaKnown RBP14.78□□□□□ -0.04
CCDC58-207ENST00000498466 FOXJ1Q92949 421 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 XPO6Q96QU8 1125 aaKnown RBP14.78□□□□□ -0.04
CCDC58-207ENST00000498466 KCNK16Q96T55 309 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 SLC6A17Q9H1V8 727 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 CD93Q9NPY3 652 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 HSPBP1Q9NZL4 362 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 RAD54BQ9Y620 910 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 GON4LQ3T8J9 2241 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 PI4KAP42356 2102 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 ADAMTS20P59510 1910 aa14.78□□□□□ -0.04
CCDC58-207ENST00000498466 ATP8B3O60423 1300 aa14.77□□□□□ -0.04
CCDC58-207ENST00000498466 FRMD3A2A2Y4 597 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 NEDD8-MDP1E9PL57 170 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 FAM163BP0C2L3 166 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 TUBP50607 506 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 SLC5A3P53794 718 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 RABEP1Q15276 862 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms