RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 GRAP2O75791 330 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 GJA1P17302 382 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 RRM1P23921 792 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 CDC25CP30307 473 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 LTBRP36941 435 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 GABRB2P47870 512 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 RPL34P49207 117 aaKnown RBP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 YWHAGP61981 247 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 MRPS5P82675 430 aaKnown RBP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 PTP4A2Q12974 167 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 COL19A1Q14993 1142 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 HFE2Q6ZVN8 426 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 GET4Q7L5D6 327 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 GPR149Q86SP6 731 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 KIAA1328Q86T90 577 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 ZDHHC17Q8IUH5 632 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 LEMD2Q8NC56 503 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 ING5Q8WYH8 240 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 SELENOOQ9BVL4 669 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 THAP2Q9H0W7 228 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 ISCUQ9H1K1 167 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 TRPC7Q9HCX4 862 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 TLR8Q9NR97 1041 aaKnown RBP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 TRPM5Q9NZQ8 1165 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 DNMT3BQ9UBC3 853 aaKnown RBP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 CD207Q9UJ71 328 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 EPN1Q9Y6I3 576 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-227ENST00000498056 USP3Q9Y6I4 520 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 YJEFN3A6XGL0 299 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 E7ENQ6 273 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 GJB6O95452 261 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 FGF19O95750 216 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 LTFP02788 710 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 MYBL1P10243 752 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 MAGEA1P43355 309 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 GALCP54803 685 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 SLC6A3Q01959 620 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 ITIH3Q06033 890 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 SLC5A9Q2M3M2 681 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 BHLHA9Q7RTU4 235 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 ARHGAP18Q8N392 663 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 SMRP1Q8NCR6 262 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 C3orf20Q8ND61 904 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 SHKBP1Q8TBC3 707 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 OVCA2Q8WZ82 227 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 IRGQQ8WZA9 623 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
CPNE1-227ENST00000498056 ARHGEF26Q96DR7 871 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 TCEAL4Q96EI5 215 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 MYRFLQ96LU7 910 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 RIPOR3Q96MK2 946 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 MCEEQ96PE7 176 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 LRRC3Q9BY71 257 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 ADAM7Q9H2U9 754 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 ATXN3LQ9H3M9 355 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 SLITRK6Q9H5Y7 841 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 IL21Q9HBE4 155 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 WDR35Q9P2L0 1181 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 CHORDC1Q9UHD1 332 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-227ENST00000498056 TFR2Q9UP52 801 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 SCINQ9Y6U3 715 aa14.23□□□□□ -0.13
CPNE1-227ENST00000498056 FAM92AA1XBS5 289 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 ANKRD62A6NC57 917 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 CAPN9O14815 690 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 HSF2BPO75031 334 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 DAB1O75553 588 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 LCA5LO95447 670 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 TMEM253P0C7T8 217 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 CEBPBP17676 345 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 CCR2P41597 374 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 EPHA5P54756 1037 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 GSCP56915 257 aaPredicted RBP14.22□□□□□ -0.13
CPNE1-227ENST00000498056 RNASE9P60153 205 aaKnown RBP14.22□□□□□ -0.13
CPNE1-227ENST00000498056 ARHGAP15Q53QZ3 475 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 STXBP5Q5T5C0 1151 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 BTBD8Q5XKL5 378 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 GAREM2Q75VX8 874 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
CPNE1-227ENST00000498056 SLC26A9Q7LBE3 791 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 SCML4Q8N228 414 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 EDEM1Q92611 657 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 VCPIP1Q96JH7 1222 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 MSLNLQ96KJ4 702 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 TRIM62Q9BVG3 475 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 NACA2Q9H009 215 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 NMUR1Q9HB89 426 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 IL37Q9NZH6 218 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 REXO2Q9Y3B8 237 aaKnown RBP14.22□□□□□ -0.13
CPNE1-227ENST00000498056 MRPS23Q9Y3D9 190 aaKnown RBP14.22□□□□□ -0.13
CPNE1-227ENST00000498056 PCDHA13Q9Y5I0 950 aa14.22□□□□□ -0.13
CPNE1-227ENST00000498056 NRG2O14511 850 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-227ENST00000498056 ZNF197O14709 1029 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 TLR5O60602 858 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 RALAP11233 206 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 FSHRP23945 695 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 SCNN1AP37088 669 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 MTHFRP42898 656 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 PGFP49763 221 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms