RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RFX1P22670 979 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF165P49910 485 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 TUBP50607 506 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 COPB1P53618 953 aaKnown RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 SLC8A3P57103 927 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 PFKPQ01813 784 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 KCNMA1Q12791 1236 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 STILQ15468 1287 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 PKDCCQ504Y2 493 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 SNX30Q5VWJ9 437 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 LCLAT1Q6UWP7 414 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 HFE2Q6ZVN8 426 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 APTXQ7Z2E3 356 aaKnown RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 PIGZQ86VD9 579 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 DHX40Q8IX18 779 aaKnown RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 ANKRD20A12PQ8NF67 263 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 DNASE1L2Q92874 299 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 TRMT61BQ9BVS5 477 aaKnown RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 UBXN6Q9BZV1 441 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 VPS16Q9H269 839 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 TDP1Q9NUW8 608 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 GMIPQ9P107 970 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 AJAP1Q9UKB5 411 aaPredicted RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 FBXL21Q9UKT6 434 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 SCML2Q9UQR0 700 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 CCL26Q9Y258 94 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 COL4A3Q01955 1670 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 LRRC10BA6NIK2 292 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 LGALS16A8MUM7 142 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 ARNTLO00327 626 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 XPO1O14980 1071 aaKnown RBP11.85□□□□□ -0.51
ERCC8-208ENST00000497892 CYP26A1O43174 497 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 ATP1A3P13637 1013 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 BRD2P25440 801 aaKnown RBP11.85□□□□□ -0.51
ERCC8-208ENST00000497892 GDI1P31150 447 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 PLA2G4AP47712 749 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 KIF11P52732 1056 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 PDE4CQ08493 712 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 BST2Q10589 180 aaKnown RBP11.85□□□□□ -0.51
ERCC8-208ENST00000497892 CNGA2Q16280 664 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 MEA1Q16626 185 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 RAB41Q5JT25 222 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 FKBP15Q5T1M5 1219 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 SIX5Q8N196 739 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 ARL14EPQ8N8R7 260 aaPredicted RBP11.85□□□□□ -0.51
ERCC8-208ENST00000497892 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 BPIFB1Q8TDL5 484 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 IRF7Q92985 503 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 CYP2S1Q96SQ9 504 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 BRD9Q9H8M2 597 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 TRPV5Q9NQA5 729 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 DNAJC12Q9UKB3 198 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
ERCC8-208ENST00000497892 KRBA1A5PL33 1030 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 SMTNL1A8MU46 457 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 TULP2O00295 520 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF263O14978 683 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 CHADO15335 359 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 ABL1P00519 1130 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 PDGFBP01127 241 aaPredicted RBP11.84□□□□□ -0.51
ERCC8-208ENST00000497892 CALCAP01258 141 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 UCHL3P15374 230 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 TCF3P15923 654 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 HDCP19113 662 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 SLC7A9P82251 487 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 USP4Q13107 963 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 IQCB1Q15051 598 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF77Q15935 545 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 KLHDC7AQ5VTJ3 777 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 YAF2Q8IY57 180 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 UBA3Q8TBC4 463 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 PBXIP1Q96AQ6 731 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 LSM14BQ9BX40 385 aaKnown RBP11.84□□□□□ -0.51
ERCC8-208ENST00000497892 NAA15Q9BXJ9 866 aaKnown RBP11.84□□□□□ -0.51
ERCC8-208ENST00000497892 PLCB1Q9NQ66 1216 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 CYLDQ9NQC7 956 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 TLR8Q9NR97 1041 aaKnown RBP11.84□□□□□ -0.51
ERCC8-208ENST00000497892 CA14Q9ULX7 337 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
ERCC8-208ENST00000497892 F5P12259 2224 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 M0QYV0 167 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 COCHO43405 550 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 CAVIN2O95810 425 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 CDK11BP21127 795 aaKnown RBP11.83□□□□□ -0.52
ERCC8-208ENST00000497892 GNA15P30679 374 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 USP8P40818 1118 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 PGFP49763 221 aa11.83□□□□□ -0.52
ERCC8-208ENST00000497892 TKTL1P51854 596 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms