RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FEZF2Q8TBJ5 459 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 CPA5Q8WXQ8 436 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 FBXO32Q969P5 355 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 TRMT2BQ96GJ1 504 aaKnown RBP21.08■□□□□ 0.97
CTSD-206ENST00000497544 PPP1R13BQ96KQ4 1090 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 SLITRK1Q96PX8 696 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 GCNAQ96QF7 691 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 PCDHB18PQ96TA0 734 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 TTLL2Q9BWV7 592 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 SYNCQ9H7C4 482 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 ZNF334Q9HCZ1 680 aaPredicted RBP21.08■□□□□ 0.97
CTSD-206ENST00000497544 IL37Q9NZH6 218 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 CYTH4Q9UIA0 394 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 CFAP47Q6ZTR5 3102 aa21.08■□□□□ 0.96
CTSD-206ENST00000497544 GABRR2P28476 465 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 TAF10Q12962 218 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 NAA35Q5VZE5 725 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 SIX6OS1Q8N1H7 587 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 MSANTD4Q8NCY6 345 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 IPO4Q8TEX9 1081 aaKnown RBP21.07■□□□□ 0.96
CTSD-206ENST00000497544 PANX2Q96RD6 677 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 SYT11Q9BT88 431 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 SLC4A5Q9BY07 1137 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 LRRC3Q9BY71 257 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 DEF6Q9H4E7 631 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 WDR6Q9NNW5 1121 aaKnown RBP21.07■□□□□ 0.96
CTSD-206ENST00000497544 CYLDQ9NQC7 956 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 ARHGAP20Q9P2F6 1191 aa21.07■□□□□ 0.96
CTSD-206ENST00000497544 USP15Q9Y4E8 981 aaPredicted RBP21.07■□□□□ 0.96
CTSD-206ENST00000497544 PIK3R2O00459 728 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 PLEKP08567 350 aaPredicted RBP21.06■□□□□ 0.96
CTSD-206ENST00000497544 CDC25CP30307 473 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 PPP3CCP48454 512 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 EPHA5P54756 1037 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 NOMO3P69849 1222 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 ADIGQ0VDE8 80 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 PDCLQ13371 301 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 CLEC16AQ2KHT3 1053 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 TMEM110Q86TL2 294 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 TMC8Q8IU68 726 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 NECTIN4Q96NY8 510 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 CPXM1Q96SM3 734 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 CHP1Q99653 195 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 ULBP1Q9BZM6 244 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 MIS12Q9H081 205 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 ATXN3LQ9H3M9 355 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 AVENQ9NQS1 362 aaPredicted RBP21.06■□□□□ 0.96
CTSD-206ENST00000497544 TRPM5Q9NZQ8 1165 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 CHORDC1Q9UHD1 332 aaPredicted RBP21.06■□□□□ 0.96
CTSD-206ENST00000497544 ADAMTS1Q9UHI8 967 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 CDH22Q9UJ99 828 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 SCML2Q9UQR0 700 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 MRPS23Q9Y3D9 190 aaKnown RBP21.06■□□□□ 0.96
CTSD-206ENST00000497544 USP3Q9Y6I4 520 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 PATJQ8NI35 1801 aa21.06■□□□□ 0.96
CTSD-206ENST00000497544 NOTCH4Q99466 2003 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 SSU72P8A0A1W2PR75 194 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 ZBED1O96006 694 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 ABL1P00519 1130 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 F11P03951 625 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 USP17L7P0C7H9 530 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 UNGP13051 313 aaPredicted RBP21.05■□□□□ 0.96
CTSD-206ENST00000497544 FSHRP23945 695 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 EIF4A3P38919 411 aaKnown RBP21.05■□□□□ 0.96
CTSD-206ENST00000497544 NSFP46459 744 aaKnown RBP21.05■□□□□ 0.96
CTSD-206ENST00000497544 RPL34P49207 117 aaKnown RBP21.05■□□□□ 0.96
CTSD-206ENST00000497544 GSDMDP57764 484 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 CDK17Q00537 523 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 ACAD10Q6JQN1 1059 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 PDZD8Q8NEN9 1154 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 SLC30A5Q8TAD4 765 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 OVCA2Q8WZ82 227 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 CCDC42Q96M95 316 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 IL21Q9HBE4 155 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 CNGB3Q9NQW8 809 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 ACACBO00763 2458 aa21.05■□□□□ 0.96
CTSD-206ENST00000497544 A0A1W2PRU2 124 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 FAM170AA1A519 330 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 FAM92AA1XBS5 289 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 E5RJQ4 531 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 DDX3XO00571 662 aaKnown RBP eCLIP21.04■□□□□ 0.96
CTSD-206ENST00000497544 GABBR2O75899 941 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 FBXO21O94952 628 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
CTSD-206ENST00000497544 ARHGAP15Q53QZ3 475 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 PM20D1Q6GTS8 502 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 PPP1R2P3Q6NXS1 205 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 GAREM2Q75VX8 874 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 CCDC186Q7Z3E2 898 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 MON1AQ86VX9 555 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 SCUBE3Q8IX30 993 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 SCML4Q8N228 414 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 MRPS31Q92665 395 aaKnown RBP21.04■□□□□ 0.96
CTSD-206ENST00000497544 C18orf8Q96DM3 657 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 TLR8Q9NR97 1041 aaKnown RBP21.04■□□□□ 0.96
CTSD-206ENST00000497544 CLUHO75153 1309 aa21.04■□□□□ 0.96
CTSD-206ENST00000497544 TMCO5BA8MYB1 307 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 AKR1B10O60218 316 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 GZMAP12544 262 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 GJA1P17302 382 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms