RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PSMA3P25788 255 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ECHS1P30084 290 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 CTNNA1P35221 906 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 MMP14P50281 582 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 MAP2K6P52564 334 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 BPIFB3P59826 476 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 NEXNQ0ZGT2 675 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 FOXL1Q12952 345 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 MTM1Q13496 603 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 SPARCL1Q14515 664 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ICAM4Q14773 271 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 NOMO1Q15155 1222 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 TIGD6Q17RP2 521 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM214AQ32MH5 1076 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 RILPL1Q5EBL4 403 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 HECTD3Q5T447 861 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 CFAP58Q5T655 872 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 MFSD4BQ5TF39 518 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 C1QL3Q5VWW1 255 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ZNF449Q6P9G9 518 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 RTL10Q7L3V2 364 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 GPRIN1Q7Z2K8 1008 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 LMNTD2Q8IXW0 634 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 TEX11Q8IYF3 940 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ARL10Q8N8L6 244 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 DCBLD1Q8N8Z6 715 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ZMIZ2Q8NF64 920 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 IL31RAQ8NI17 732 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 IFI44Q8TCB0 444 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 Q8TCH9 128 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 SSH3Q8TE77 659 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ANKS1AQ92625 1134 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 VMP1Q96GC9 406 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ZC3H10Q96K80 434 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 MRGPRX4Q96LA9 322 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM167BQ9BTA0 163 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 COLEC11Q9BWP8 271 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 AGXT2Q9BYV1 514 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 XPO4Q9C0E2 1151 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 GHITMQ9H3K2 345 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 NELFAQ9H3P2 528 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ARMT1Q9H993 441 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 IRAK4Q9NWZ3 460 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 PLA2G3Q9NZ20 509 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 TBC1D29Q9UFV1 150 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ZFR2Q9UPR6 939 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 SH3BP1Q9Y3L3 701 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 ITSN1Q15811 1721 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 TIAM2Q8IVF5 1701 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 SPATA31A3Q5VYP0 1347 aa4.11□□□□□ -1.75
EXOSC3-208ENST00000496910 PARP4Q9UKK3 1724 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM186AA6NE01 2351 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 AQP12BA6NM10 295 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 B4DLN1 442 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 FOXN3O00409 490 aaPredicted RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 SGTAO43765 313 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 DKC1O60832 514 aaKnown RBP eCLIP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 ENDOD1O94919 500 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 IL18RAPO95256 599 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 PARP1P09874 1014 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 RPL17P18621 184 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 MUTP22033 750 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 EEF1GP26641 437 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 RPS19P39019 145 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 IL12RB1P42701 662 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 COPAP53621 1224 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 CLNS1AP54105 237 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 PLIN5Q00G26 463 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 FMO1Q01740 532 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 CREMQ03060 361 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 DUSP2Q05923 314 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 ARL13BQ3SXY8 428 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 GJC2Q5T442 439 aaPredicted RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 HAUS3Q68CZ6 603 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM111BQ6SJ93 734 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 MAMDC4Q6UXC1 1216 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 CNTROBQ8N137 903 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 MDM1Q8TC05 714 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 STT3BQ8TCJ2 826 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 KAT5Q92993 513 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 ZNF566Q969W8 418 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 CCDC47Q96A33 483 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 MPHOSPH8Q99549 860 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 CPEB1Q9BZB8 566 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 C12orf65Q9H3J6 166 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 JMJD4Q9H9V9 463 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 PNPLA8Q9NP80 782 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 RNF186Q9NXI6 227 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 KIF17Q9P2E2 1029 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 SLC23A1Q9UHI7 598 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 SLC39A10Q9ULF5 831 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 TMCC3Q9ULS5 477 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 PCDHA13Q9Y5I0 950 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 SPAG9O60271 1321 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 ATP7BP35670 1465 aa4.1□□□□□ -1.75
EXOSC3-208ENST00000496910 RIF1Q5UIP0 2472 aaKnown RBP4.09□□□□□ -1.75
EXOSC3-208ENST00000496910 A0A1W2PRX2 142 aa4.09□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM234BA2RU67 622 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms