RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CA8P35219 290 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 GLUD2P49448 558 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 GTF2A1P52655 376 aaPredicted RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 ATXN1P54253 815 aaKnown RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 YWHAZP63104 245 aaKnown RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 PITX1P78337 314 aaPredicted RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 SLC25A11Q02978 314 aaKnown RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 GPR17Q13304 367 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 SCYL2Q6P3W7 929 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 RSRC2Q7L4I2 434 aaKnown RBP17.67■□□□□ 0.42
LMNA-216ENST00000496738 MTRRQ9UBK8 725 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 INSL6Q9Y581 213 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 SYNJ2BP-COX16A0A087WUM0 186 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 DPYSL4O14531 572 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 TLL1O43897 1013 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 ROR1Q01973 937 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 MGAT5BQ3V5L5 792 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 SYPL2Q5VXT5 272 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 ANKS1BQ7Z6G8 1248 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 VPS52Q8N1B4 723 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 PIK3R5Q8WYR1 880 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 EDEM1Q92611 657 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 FUBP3Q96I24 572 aaKnown RBP eCLIP17.67■□□□□ 0.42
LMNA-216ENST00000496738 PEBP4Q96S96 227 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 UBXN6Q9BZV1 441 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 CNGB3Q9NQW8 809 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.67■□□□□ 0.423e-8■■□□□ 12.4
LMNA-216ENST00000496738 COX16Q9P0S2 106 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 RNF14Q9UBS8 474 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 NAALADL1Q9UQQ1 740 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 TCRBV7S2A1N4TA0A589 114 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 FBXO21O94952 628 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 RHOXF2BP0C7M4 288 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 LINC00271P0C7V0 271 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 SCNN1AP37088 669 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 DUSP4Q13115 394 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
LMNA-216ENST00000496738 BHLHA9Q7RTU4 235 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 HSPH1Q92598 858 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 TBCBQ99426 244 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 RHOXF2Q9BQY4 288 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 HERC2P3Q9BVR0 1158 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 USP18Q9UMW8 372 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 NR2E1Q9Y466 385 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 PATJQ8NI35 1801 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 KRIT1O00522 736 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 DAB1O75553 588 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 FGF18O76093 207 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 SULT1E1P49888 294 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 DDX53Q86TM3 631 aaKnown RBP17.66■□□□□ 0.42
LMNA-216ENST00000496738 KATNAL2Q8IYT4 538 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 ADAM32Q8TC27 787 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 SLC9A7Q96T83 725 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 CLSTN3Q9BQT9 956 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 HERPUD2Q9BSE4 406 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 HEMGNQ9BXL5 484 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 PLEKHA4Q9H4M7 779 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 AAASQ9NRG9 546 aa17.66■□□□□ 0.42
LMNA-216ENST00000496738 TNFRSF10BO14763 440 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 CAPN9O14815 690 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 FYNP06241 537 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 MATKP42679 507 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 DSG1Q02413 1049 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 HADHQ16836 314 aaKnown RBP17.65■□□□□ 0.42
LMNA-216ENST00000496738 C9orf50Q5SZB4 431 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 ZNF572Q7Z3I7 529 aaPredicted RBP17.65■□□□□ 0.42
LMNA-216ENST00000496738 SPRED2Q7Z698 418 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 KLHL7Q8IXQ5 586 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 RAPGEF5Q92565 580 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 RAD9AQ99638 391 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 POPDC2Q9HBU9 364 aa17.65■□□□□ 0.42
LMNA-216ENST00000496738 LRRD1A4D1F6 860 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 LTFP02788 710 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 URODP06132 367 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 PGFP49763 221 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 HDAC4P56524 1084 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 SLC8B1Q6J4K2 584 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 VSTM1Q6UX27 236 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 KLHL23Q8NBE8 558 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 DDX23Q9BUQ8 820 aaKnown RBP17.64■□□□□ 0.42
LMNA-216ENST00000496738 PNPLA8Q9NP80 782 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 GPATCH2LQ9NWQ4 482 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 RSPH14Q9UHP6 348 aa17.64■□□□□ 0.42
LMNA-216ENST00000496738 LAMA2P24043 3122 aaKnown RBP17.64■□□□□ 0.42
LMNA-216ENST00000496738 GRXCR1A8MXD5 290 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 TRIM66O15016 1216 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 CAPN15O75808 1086 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 ZRANB2O95218 330 aaKnown RBP eCLIP17.64■□□□□ 0.41
LMNA-216ENST00000496738 TRUB2O95900 331 aaKnown RBP17.64■□□□□ 0.41
LMNA-216ENST00000496738 RALAP11233 206 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 NCAM1P13591 858 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 MYOGP15173 224 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 PPM1AP35813 382 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 USP46P62068 366 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 ODF2Q5BJF6 829 aa17.64■□□□□ 0.41
LMNA-216ENST00000496738 SPPL2BQ8TCT7 592 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms