RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 FBXO4Q9UKT5 387 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 PCDHB4Q9Y5E5 795 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 EP300Q09472 2414 aaPredicted RBP15.27■□□□□ 0.03
PDAP1-204ENST00000496335 RNF225M0QZC1 329 aaPredicted RBP15.26■□□□□ 0.03
PDAP1-204ENST00000496335 TULP2O00295 520 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 GFRA3O60609 400 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 CALCAP01258 141 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 SATB1Q01826 763 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 ZNF528Q3MIS6 628 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 SGO2Q562F6 1265 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 SCD5Q86SK9 330 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 PIGZQ86VD9 579 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 ADGRG2Q8IZP9 1017 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 TFAP2BQ92481 460 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 NKD2Q969F2 451 aaPredicted RBP15.26■□□□□ 0.03
PDAP1-204ENST00000496335 IPO9Q96P70 1041 aaKnown RBP15.26■□□□□ 0.03
PDAP1-204ENST00000496335 P2RY13Q9BPV8 354 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 INTS2Q9H0H0 1204 aaKnown RBP15.26■□□□□ 0.03
PDAP1-204ENST00000496335 PRMT8Q9NR22 394 aaPredicted RBP15.26■□□□□ 0.03
PDAP1-204ENST00000496335 C2orf42Q9NWW7 574 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 TSPAN16Q9UKR8 245 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 USP3Q9Y6I4 520 aa15.26■□□□□ 0.03
PDAP1-204ENST00000496335 PRR23AA6NEV1 266 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 MDM4O15151 490 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 NFATC1O95644 943 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 EGFP01133 1207 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 CYP17A1P05093 508 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 IRF1P10914 325 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 VDRP11473 427 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 RARGP13631 454 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 AMPD2Q01433 879 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 PDE4CQ08493 712 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 GRSF1Q12849 480 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDAP1-204ENST00000496335 NR1H3Q13133 447 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 PKN3Q6P5Z2 889 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 CCDC186Q7Z3E2 898 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 DDX42Q86XP3 938 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDAP1-204ENST00000496335 SPEM1Q8N4L4 309 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 UBA3Q8TBC4 463 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 GBP4Q96PP9 640 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 ZSWIM1Q9BR11 485 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 CRACR2AQ9BSW2 395 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 UBXN6Q9BZV1 441 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 NAGPAQ9UK23 515 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 GPR179Q6PRD1 2367 aa15.25■□□□□ 0.03
PDAP1-204ENST00000496335 E2F8A0AVK6 867 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 O00370 1275 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 SLC9A3R1O14745 358 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 TDGF1P13385 188 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 HOXC13P31276 330 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 ATP5C1P36542 298 aaKnown RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 CXCL12P48061 93 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 CCR3P51677 355 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 SLC8A3P57103 927 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 GCNT1Q02742 428 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 DHCR24Q15392 516 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 TPD52L1Q16890 204 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 GAB4Q2WGN9 574 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 RAB41Q5JT25 222 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 C10orf120Q5SQS8 335 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 RHBDF2Q6PJF5 856 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 SYNPOQ8N3V7 929 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 KIAA1958Q8N8K9 716 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 RBBP8NLQ8NC74 664 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 NDRG1Q92597 394 aaKnown RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 EZH1Q92800 747 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 CD101Q93033 1021 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 IER2Q9BTL4 223 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 KLF16Q9BXK1 252 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDAP1-204ENST00000496335 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 SH3BP1Q9Y3L3 701 aa15.24■□□□□ 0.03
PDAP1-204ENST00000496335 XPO1O14980 1071 aaKnown RBP15.23■□□□□ 0.03
PDAP1-204ENST00000496335 PAEPP09466 180 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 SLC9A1P19634 815 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
PDAP1-204ENST00000496335 OPRD1P41143 372 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
PDAP1-204ENST00000496335 TKTL1P51854 596 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 BCAT1P54687 386 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 APBA1Q02410 837 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 BST2Q10589 180 aaKnown RBP15.23■□□□□ 0.03
PDAP1-204ENST00000496335 HSP90AA4PQ58FG1 418 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 GJB7Q6PEY0 223 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 BBS7Q8IWZ6 715 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 NELL1Q92832 810 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 ULBP1Q9BZM6 244 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 UBE2TQ9NPD8 197 aaPredicted RBP15.23■□□□□ 0.03
PDAP1-204ENST00000496335 POLR3BQ9NW08 1133 aaPredicted RBP15.23■□□□□ 0.03
PDAP1-204ENST00000496335 TBC1D14Q9P2M4 693 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 KIAA1257Q9ULG3 409 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 GVINP1Q7Z2Y8 2422 aa15.23■□□□□ 0.03
PDAP1-204ENST00000496335 OTOGLQ3ZCN5 2332 aa15.22■□□□□ 0.03
PDAP1-204ENST00000496335 MYO18AQ92614 2054 aaKnown RBP15.22■□□□□ 0.03
PDAP1-204ENST00000496335 GREM1O60565 184 aa15.22■□□□□ 0.03
PDAP1-204ENST00000496335 RNF40O75150 1001 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms