RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
THBS3-208ENST00000496332 A0A1W2PQH9 124 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 IRF1P10914 325 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 HOXC13P31276 330 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 OPRD1P41143 372 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 KIF11P52732 1056 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
THBS3-208ENST00000496332 FBXO43Q4G163 708 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 ARHGAP17Q68EM7 881 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 HEATR6Q6AI08 1181 aaKnown RBP12.48□□□□□ -0.41
THBS3-208ENST00000496332 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 TRIML1Q8N9V2 468 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 RUBCNQ92622 972 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 EZH1Q92800 747 aaPredicted RBP12.48□□□□□ -0.41
THBS3-208ENST00000496332 HINFPQ9BQA5 517 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 SRRTQ9BXP5 876 aaKnown RBP12.48□□□□□ -0.41
THBS3-208ENST00000496332 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 TBC1D14Q9P2M4 693 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 SH3BP1Q9Y3L3 701 aa12.48□□□□□ -0.41
THBS3-208ENST00000496332 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
THBS3-208ENST00000496332 PMM2O15305 246 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 GNA14O95837 355 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 ADH1CP00326 375 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 RARGP13631 454 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 TBXAS1P24557 533 aaPredicted RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 ANP32AP39687 249 aaKnown RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 SLC6A11P48066 632 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 CETN1Q12798 172 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 GAB4Q2WGN9 574 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 CCDC186Q7Z3E2 898 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 SCD5Q86SK9 330 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 LONP2Q86WA8 852 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 TRIM59Q8IWR1 403 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 DCLK2Q8N568 766 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 UBR7Q8N806 425 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 ANKRD52Q8NB46 1076 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 RPLP0P6Q8NHW5 317 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 WBP2Q969T9 261 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 NT5C1BQ96P26 610 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 NAGPAQ9UK23 515 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 NUDT5Q9UKK9 219 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 SMG5Q9UPR3 1016 aaKnown RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 USP3Q9Y6I4 520 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 ZNF292O60281 2723 aa12.47□□□□□ -0.41
THBS3-208ENST00000496332 HELZP42694 1942 aaKnown RBP12.47□□□□□ -0.41
THBS3-208ENST00000496332 FANCMQ8IYD8 2048 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 P4HA2O15460 535 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 HRO43593 1189 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 ADH5P11766 374 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 CD19P15391 556 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 HOXA6P31267 233 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 PSEN1P49768 467 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.41
THBS3-208ENST00000496332 SLC8A3P57103 927 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 SRSF5Q13243 272 aaKnown RBP12.46□□□□□ -0.41
THBS3-208ENST00000496332 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 SGO2Q562F6 1265 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 LY6G5CQ5SRR4 150 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 PIGZQ86VD9 579 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 TTC30AQ86WT1 665 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 BBS7Q8IWZ6 715 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 EHBP1Q8NDI1 1231 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 LMO3Q8TAP4 145 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 OTUB2Q96DC9 234 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
THBS3-208ENST00000496332 NCDNQ9UBB6 729 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 TSPAN16Q9UKR8 245 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 KIAA1257Q9ULG3 409 aa12.46□□□□□ -0.41
THBS3-208ENST00000496332 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.46□□□□□ -0.41
THBS3-208ENST00000496332 PTPRZ1P23471 2315 aaPredicted RBP12.46□□□□□ -0.41
THBS3-208ENST00000496332 K7EQS6 105 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 TULP2O00295 520 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 MDM4O15151 490 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 GREM1O60565 184 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
THBS3-208ENST00000496332 AFPP02771 609 aaKnown RBP12.45□□□□□ -0.42
THBS3-208ENST00000496332 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 RALAP11233 206 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 VDRP11473 427 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 CNR2P34972 360 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
THBS3-208ENST00000496332 SEC13P55735 322 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 GAD2Q05329 585 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 PDE4CQ08493 712 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 GOLGA8FQ08AF8 430 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 GOLGA8DPQ0D2H9 430 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 SIM2Q14190 667 aaPredicted RBP12.45□□□□□ -0.42
THBS3-208ENST00000496332 LPAL2Q16609 132 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 RAB41Q5JT25 222 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 KLHDC10Q6PID8 442 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 TMEM270Q6UE05 265 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 PRR23BQ6ZRT6 265 aa12.45□□□□□ -0.42
THBS3-208ENST00000496332 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms