RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TLDC1Q6P9B6 456 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 LDHAL6AQ6ZMR3 332 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 ZNF517Q6ZMY9 492 aaPredicted RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 TECPR1Q7Z6L1 1165 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 GAS2L3Q86XJ1 694 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 CACNA2D3Q8IZS8 1091 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 FAM9AQ8IZU1 332 aaPredicted RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 POC1BQ8TC44 478 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 STYXQ8WUJ0 223 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 RGS17Q9UGC6 210 aaPredicted RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 HDAC9Q9UKV0 1011 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 SCAF8Q9UPN6 1271 aaKnown RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 MRPS17Q9Y2R5 130 aaKnown RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 PODXLO00592 558 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 AREL1O15033 823 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 FFAR2O15552 330 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 TNFRSF6BO95407 300 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 CSTBP04080 98 aaKnown RBP4.43□□□□□ -1.7
CLK1-214ENST00000496205 PPP3CBP16298 524 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 KCNA2P16389 499 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 IL1R2P27930 398 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 MPGP29372 298 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 ITGA8P53708 1063 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 WNT3P56703 355 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 RPS7P62081 194 aaKnown RBP4.43□□□□□ -1.7
CLK1-214ENST00000496205 ICA1Q05084 483 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 RAB30Q15771 203 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 PFKFB4Q16877 469 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 PTCHD3Q3KNS1 767 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 CCDC38Q502W7 563 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 PLA1AQ53H76 456 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 RAP1GAP2Q684P5 730 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 AWAT2Q6E213 333 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 CRTC1Q6UUV9 634 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 KIAA0408Q6ZU52 694 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 YTHDF3Q7Z739 585 aaKnown RBP4.43□□□□□ -1.7
CLK1-214ENST00000496205 CLNKQ7Z7G1 428 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 NEK8Q86SG6 692 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 ATG16L2Q8NAA4 619 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 ZNF527Q8NB42 609 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 OR1N1Q8NGS0 311 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 CYP2W1Q8TAV3 490 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 MUL1Q969V5 352 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 QTRT1Q9BXR0 403 aaKnown RBP4.43□□□□□ -1.7
CLK1-214ENST00000496205 ADGRE3Q9BY15 652 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 SERHLQ9NQF3 203 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 RGL1Q9NZL6 768 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 DNMT3BQ9UBC3 853 aaKnown RBP4.43□□□□□ -1.7
CLK1-214ENST00000496205 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
CLK1-214ENST00000496205 MAGED2Q9UNF1 606 aaPredicted RBP4.43□□□□□ -1.7
CLK1-214ENST00000496205 CCDC195A0A1B0GUA6 201 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 MYO1CO00159 1063 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 ACKR2O00590 384 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 KCNQ3O43525 872 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 RRP9O43818 475 aaKnown RBP4.42□□□□□ -1.7
CLK1-214ENST00000496205 EPHB2P29323 1055 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 GRK6P43250 576 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 GCLCP48506 637 aaPredicted RBP4.42□□□□□ -1.7
CLK1-214ENST00000496205 PTDSS1P48651 473 aaKnown RBP4.42□□□□□ -1.7
CLK1-214ENST00000496205 DYRK1AQ13627 763 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 BLMHQ13867 455 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 SUPT20HL1Q3ZLR7 823 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 ZACNQ401N2 412 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 FAM153CQ494X1 144 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 SLC9A4Q6AI14 798 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 PLAG1Q6DJT9 500 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
CLK1-214ENST00000496205 BEND5Q7L4P6 421 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 ADGRG5Q8IZF4 528 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 RMDN3Q96TC7 470 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 SMOQ99835 787 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 SH2D3AQ9BRG2 576 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 MAGEH1Q9H213 219 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 CXorf36Q9H7Y0 433 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 DKK4Q9UBT3 224 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 CEP83Q9Y592 693 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 DGKBQ9Y6T7 804 aa4.42□□□□□ -1.7
CLK1-214ENST00000496205 LOC102723971A0A1B0GUV8 181 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 hCG_1642624A0A1W2PR95 340 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 GOLGA6L3A6NEY3 463 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 PIP5K1BO14986 540 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 TLR5O60602 858 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 CSF1RP07333 972 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 NHLRC4P0CG21 123 aaPredicted RBP4.41□□□□□ -1.7
CLK1-214ENST00000496205 PECAM1P16284 738 aaPredicted RBP4.41□□□□□ -1.7
CLK1-214ENST00000496205 CPT1AP50416 773 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 CCT4P50991 539 aaKnown RBP4.41□□□□□ -1.7
CLK1-214ENST00000496205 RENBPP51606 427 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 SP2Q02086 613 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 ZNF844Q08AG5 666 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 FHL3Q13643 280 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 RAPGEF1Q13905 1077 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 ARHGEF7Q14155 803 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 SPARCL1Q14515 664 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 SLC29A2Q14542 456 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 IQCB1Q15051 598 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms