RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CDKN2BP42772 138 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 PTPN9P43378 593 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 FLT3LGP49771 235 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 RGS7P49802 495 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 ARSEP51690 589 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 PPP2R2AP63151 447 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 ROR1Q01973 937 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SP3Q02447 781 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SLC25A11Q02978 314 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 ZNF844Q08AG5 666 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 ZNF252P-AS1Q0IIN9 211 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 PTK7Q13308 1070 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 MORF4L2Q15014 288 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 MAPRE1Q15691 268 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 PTGISQ16647 500 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 CDO1Q16878 200 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 TTMPQ5BVD1 217 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 KCTD16Q68DU8 428 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SCYL2Q6P3W7 929 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 ZDHHC24Q6UX98 284 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 CXCL17Q6UXB2 119 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SLC26A9Q7LBE3 791 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 CPNE8Q86YQ8 564 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 CDKL3Q8IVW4 592 aaPredicted RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 HOMEZQ8IX15 550 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 CNPY4Q8N129 248 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SIX6OS1Q8N1H7 587 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 CRYBG2Q8N1P7 616 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 WDTC1Q8N5D0 677 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 ALLCQ8N6M5 410 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 EMC1Q8N766 993 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 B3GALNT2Q8NCR0 500 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 JOSD2Q8TAC2 188 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 RAET1EQ8TD07 263 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 RXFP2Q8WXD0 754 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 TRIB2Q92519 343 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 P3H4Q92791 437 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 NKD2Q969F2 451 aaPredicted RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 ZMAT2Q96NC0 199 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 MRPL45Q9BRJ2 306 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 ZNF670Q9BS34 389 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SEZ6LQ9BYH1 1024 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 FRMD8Q9BZ67 464 aaPredicted RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 CDC42EP4Q9H3Q1 356 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 NGRNQ9NPE2 291 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP39-219ENST00000496047 KLHL11Q9NVR0 708 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 TMEM51Q9NW97 253 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 KLK14Q9P0G3 267 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 TPX2Q9ULW0 747 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 SHOC2Q9UQ13 582 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 HES2Q9Y543 173 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 PTCH2Q9Y6C5 1203 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 FNDC1Q4ZHG4 1894 aaPredicted RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 GREB1Q4ZG55 1949 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 DOCK4Q8N1I0 1966 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 A0A087WUV0 522 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 C2CD4BA6NLJ0 364 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 H7C0C1 242 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 CYB561D2O14569 222 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 RASGRF2O14827 1237 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 EIF3HO15372 352 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP39-219ENST00000496047 RIPK2O43353 540 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SHOX2O60902 331 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 DAB1O75553 588 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PGK1P00558 417 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 IFNB1P01574 187 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ASGR1P07306 291 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ABHD2P08910 425 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 CTSHP09668 335 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 KRT10P13645 584 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 MIPP30301 263 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 STIP1P31948 543 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 GBP2P32456 591 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 HPDP32754 393 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 THPOP40225 353 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 MLH1P40692 756 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ATP5OP48047 213 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 VPS41P49754 854 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 MMP16P51512 607 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PRMT2P55345 433 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ARL4CP56559 192 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 EIF3EP60228 445 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 DYNLT1P63172 113 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ZNF200P98182 395 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 OTUD4Q01804 1114 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 OGDHQ02218 1023 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PRKCZQ05513 592 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PDE4CQ08493 712 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 GRIK3Q13003 919 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 GPS1Q13098 491 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 NR1H3Q13133 447 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 STAT4Q14765 748 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 NR6A1Q15406 480 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 UAP1Q16222 522 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 ZSCAN26Q16670 478 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SKIDA1Q1XH10 827 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SOWAHAQ2M3V2 549 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SMTNL2Q2TAL5 461 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms