RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 E5RJQ4 531 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 DPYSL4O14531 572 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 CYP1A1P04798 512 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-235ENST00000495515 SERPING1P05155 500 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 CKMP06732 381 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 NSFP46459 744 aaKnown RBP17.96■□□□□ 0.47
HDAC6-235ENST00000495515 DAOAP59103 153 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 YWHAGP61981 247 aaKnown RBP eCLIP17.96■□□□□ 0.47
HDAC6-235ENST00000495515 NOMO3P69849 1222 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 FAM78AQ5JUQ0 283 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 NAA35Q5VZE5 725 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 BTBD8Q5XKL5 378 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 ZDHHC17Q8IUH5 632 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 SCUBE3Q8IX30 993 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 DRC7Q8IY82 874 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 GJD3Q8N144 294 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 ZSWIM3Q96MP5 696 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 ASB16Q96NS5 453 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 CPXM1Q96SM3 734 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 TRPV4Q9HBA0 871 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 LIMD1Q9UGP4 676 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 CYTH4Q9UIA0 394 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 C2orf78A6NCI8 922 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 TNFRSF10AO00220 468 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 PIK3R2O00459 728 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 NRG2O14511 850 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 TLR5O60602 858 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 MFAP3LO75121 409 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 ADCY5O95622 1261 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 OAS1P00973 400 aaKnown RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 HNRNPH3P31942 346 aaKnown RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 TBX2Q13207 712 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 CLEC16AQ2KHT3 1053 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 E4F1Q66K89 784 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 TOGARAM2Q6ZUX3 1019 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 RSRC2Q7L4I2 434 aaKnown RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 ARID3BQ8IVW6 561 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 ZNF276Q8N554 614 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 CPA5Q8WXQ8 436 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 C18orf8Q96DM3 657 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 UHRF1Q96T88 793 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-235ENST00000495515 DNAJC7Q99615 494 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 KIF9Q9HAQ2 790 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 ABCC13Q9NSE7 274 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 OBP2AQ9NY56 170 aa17.95■□□□□ 0.46
HDAC6-235ENST00000495515 GOLGA6L6A8MZA4 724 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ANHXE9PGG2 379 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ECI2O75521 394 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 GABBR2O75899 941 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 SKILP12757 684 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 RARGP13631 454 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 CDC25BP30305 580 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ATP5C1P36542 298 aaKnown RBP17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ZNF268Q14587 947 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ARID5BQ14865 1188 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 PTPN20Q4JDL3 420 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 EFHC1Q5JVL4 640 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 BSPRYQ5W0U4 402 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 OR6B2Q6IFH4 312 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 KLHDC10Q6PID8 442 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 SCD5Q86SK9 330 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 CELF5Q8N6W0 485 aaKnown RBP17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ARL14EPQ8N8R7 260 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-235ENST00000495515 RNF139Q8WU17 664 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ELSPBP1Q96BH3 223 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 NMUR1Q9HB89 426 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 OLA1Q9NTK5 396 aaKnown RBP17.94■□□□□ 0.46
HDAC6-235ENST00000495515 ABHD10Q9NUJ1 306 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 TDP1Q9NUW8 608 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.94■□□□□ 0.46
HDAC6-235ENST00000495515 DENND4AQ7Z401 1863 aa17.94■□□□□ 0.46
HDAC6-235ENST00000495515 NCOR1O75376 2440 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 YJEFN3A6XGL0 299 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 E7ENQ6 273 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 PAPSS1O43252 624 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 OLFM2O95897 454 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 LTFP02788 710 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 GLI1P08151 1106 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 MBL2P11226 248 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 UNGP13051 313 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 GABRB2P47870 512 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 ADKP55263 362 aaKnown RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 SLC7A9P82251 487 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 CENPCQ03188 943 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 HTR4Q13639 388 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 C10orf120Q5SQS8 335 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 HGSNATQ68CP4 663 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 PARM1Q6UWI2 310 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 ZNF571Q7Z3V5 609 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 DDX42Q86XP3 938 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 NDRG1Q92597 394 aaKnown RBP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 FAM149B1Q96BN6 582 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 CYP2S1Q96SQ9 504 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 PCDHB18PQ96TA0 734 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 SYT11Q9BT88 431 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC6-235ENST00000495515 CCSER2Q9H7U1 834 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 KCNK12Q9HB15 430 aa17.93■□□□□ 0.46
HDAC6-235ENST00000495515 ASNSD1Q9NWL6 643 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms