RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 SGO2Q562F6 1265 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 CREBRFQ8IUR6 639 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 PPM1KQ8N3J5 372 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 UBR7Q8N806 425 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 ANKRD52Q8NB46 1076 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 EXOC4Q96A65 974 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 OSER1Q9NX31 292 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 ZSCAN32Q9NX65 697 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 A0A1W2PQH9 124 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 EGFP01133 1207 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 AFPP02771 609 aaKnown RBP18.96■□□□□ 0.63
COL20A1-207ENST00000494913 SLC8A3P57103 927 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 TMEM270Q6UE05 265 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 MLKLQ8NB16 471 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 EHBP1Q8NDI1 1231 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 CD101Q93033 1021 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 MED15Q96RN5 788 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 UBXN6Q9BZV1 441 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 NMUR1Q9HB89 426 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 SH3BP1Q9Y3L3 701 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 PCDHGA2Q9Y5H1 932 aa18.96■□□□□ 0.63
COL20A1-207ENST00000494913 FRYLO94915 3013 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 LMNAP02545 664 aaKnown RBP18.95■□□□□ 0.62
COL20A1-207ENST00000494913 TDGF1P13385 188 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 DRD1P21728 446 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 ATP5C1P36542 298 aaKnown RBP18.95■□□□□ 0.62
COL20A1-207ENST00000494913 DHCR24Q15392 516 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 GOLGA7BQ2TAP0 167 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 RRAGAQ7L523 313 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 PIGZQ86VD9 579 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 ZBTB44Q8NCP5 570 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 NELL1Q92832 810 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 KAT5Q92993 513 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 FAM126AQ9BYI3 521 aaPredicted RBP18.95■□□□□ 0.62
COL20A1-207ENST00000494913 CYLDQ9NQC7 956 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 LMBRD1Q9NUN5 540 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 C2orf42Q9NWW7 574 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 TBC1D14Q9P2M4 693 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 HESX1Q9UBX0 185 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 NAGPAQ9UK23 515 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 TSPAN16Q9UKR8 245 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 PCDHB4Q9Y5E5 795 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 USP3Q9Y6I4 520 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 FAM186AA6NE01 2351 aa18.95■□□□□ 0.62
COL20A1-207ENST00000494913 CFAP54Q96N23 3096 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 CYP17A1P05093 508 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 IRF1P10914 325 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 VDRP11473 427 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 RARGP13631 454 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 NRLP54845 237 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 RHBDF2Q6PJF5 856 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 CCDC186Q7Z3E2 898 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 SCD5Q86SK9 330 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 WBP2Q969T9 261 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 NUP62CLQ9H1M0 184 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL20A1-207ENST00000494913 NUDT5Q9UKK9 219 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 KIAA1257Q9ULG3 409 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 ATG2BQ96BY7 2078 aa18.94■□□□□ 0.62
COL20A1-207ENST00000494913 FANCMQ8IYD8 2048 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 EP300Q09472 2414 aaPredicted RBP18.93■□□□□ 0.62
COL20A1-207ENST00000494913 RNF40O75150 1001 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 PDE4CQ08493 712 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 C10orf120Q5SQS8 335 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 PKN3Q6P5Z2 889 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 ARHGEF19Q8IW93 802 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 UBA3Q8TBC4 463 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 CNOT6LQ96LI5 555 aaKnown RBP18.93■□□□□ 0.62
COL20A1-207ENST00000494913 KLF16Q9BXK1 252 aaPredicted RBP18.93■□□□□ 0.62
COL20A1-207ENST00000494913 INTS2Q9H0H0 1204 aaKnown RBP18.93■□□□□ 0.62
COL20A1-207ENST00000494913 MYO16Q9Y6X6 1858 aa18.93■□□□□ 0.62
COL20A1-207ENST00000494913 RNF225M0QZC1 329 aaPredicted RBP18.92■□□□□ 0.62
COL20A1-207ENST00000494913 TULP2O00295 520 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 MDM4O15151 490 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 PAEPP09466 180 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 OPRD1P41143 372 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 PSEN1P49768 467 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 BCAT1P54687 386 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 GCNT1Q02742 428 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 GAB4Q2WGN9 574 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 RAB41Q5JT25 222 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 IRF2BP1Q8IU81 584 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 BBS7Q8IWZ6 715 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 TFAP2BQ92481 460 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 OTUB2Q96DC9 234 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 DNMT3LQ9UJW3 386 aa18.92■□□□□ 0.62
COL20A1-207ENST00000494913 K7ESF4 209 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 O00370 1275 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 XPO1O14980 1071 aaKnown RBP18.91■□□□□ 0.62
COL20A1-207ENST00000494913 ATG13O75143 517 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 PAPSS2O95340 614 aaPredicted RBP18.91■□□□□ 0.62
COL20A1-207ENST00000494913 ADH1CP00326 375 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 RALAP11233 206 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 TKTL1P51854 596 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 BST2Q10589 180 aaKnown RBP18.91■□□□□ 0.62
COL20A1-207ENST00000494913 TPD52L1Q16890 204 aaPredicted RBP18.91■□□□□ 0.62
COL20A1-207ENST00000494913 DPCR1Q3MIW9 517 aa18.91■□□□□ 0.62
COL20A1-207ENST00000494913 FBXO43Q4G163 708 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms