RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 IFT88Q13099 833 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 FASTKD3Q14CZ7 662 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 TAF1CQ15572 869 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 KLHL38Q2WGJ6 581 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 LACTB2Q53H82 288 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 ANKRD20A8PQ5CZ79 823 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 SH3PXD2AQ5TCZ1 1133 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 TAX1BP1Q86VP1 789 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 ZBED8Q8IZ13 594 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 TOP6BLQ8N6T0 577 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 ANKS4BQ8N8V4 417 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 CENPIQ92674 756 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 PIWIL1Q96J94 861 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 APBA2Q99767 749 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 C11orf84Q9BUA3 381 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 SNRNP25Q9BV90 132 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 VPS37BQ9H9H4 285 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 PRDM16Q9HAZ2 1276 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 KCNK9Q9NPC2 374 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 NKIRAS1Q9NYS0 192 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 SAMD15Q9P1V8 674 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 PAK5Q9P286 719 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 PSMC3IPQ9P2W1 217 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 SAE1Q9UBE0 346 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 XPO7Q9UIA9 1087 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 HES2Q9Y543 173 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 CLUHO75153 1309 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 PTPRDP23468 1912 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 RASA4BC9J798 803 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 ANKRD65E5RJM6 399 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 H7C0C1 242 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 IGF2BP3O00425 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDHA-211ENST00000494573 PIK3R2O00459 728 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 RASA4O43374 803 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 HUS1O60921 280 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 GRAP2O75791 330 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 OAS1P00973 400 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 VIMP08670 466 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 FGFR1P11362 822 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 CREB1P16220 341 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 ATP2A2P16615 1042 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 AKAP5P24588 427 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 ATP5OP48047 213 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 GPX6P59796 221 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 PPARDQ03181 441 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 XRCC4Q13426 336 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 KCNJ11Q14654 390 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 CDO1Q16878 200 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 ZC3H12AQ5D1E8 599 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 RNF187Q5TA31 235 aaPredicted RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 ANKRD22Q5VYY1 191 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 C17orf99Q6UX52 265 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 NPNTQ6UXI9 565 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 CDKL3Q8IVW4 592 aaPredicted RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 SRRM1Q8IYB3 904 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 PDIK1LQ8N165 341 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 PQLC3Q8N755 202 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 PLD5Q8N7P1 536 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 SMG8Q8ND04 991 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 APPL2Q8NEU8 664 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 PYROXD1Q8WU10 500 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 TMEM40Q8WWA1 233 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 TNIP3Q96KP6 325 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 MAGEB18Q96M61 343 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 DHRS4Q9BTZ2 278 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 APOL6Q9BWW8 343 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 ACSS3Q9H6R3 686 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 NGRNQ9NPE2 291 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 GTF2IRD1Q9UHL9 959 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 RABGEF1Q9UJ41 708 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
LDHA-211ENST00000494573 IPPQ9Y573 584 aa11.69□□□□□ -0.54
LDHA-211ENST00000494573 FAM47DPA6NHR8 397 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 CCT8L1PA6NM43 557 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 POC1B-GALNT4F8VUJ3 575 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
LDHA-211ENST00000494573 SPTLC1O15269 473 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 DAB1O75553 588 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 SPAG6O75602 509 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 TMEM63AO94886 807 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 CCDC130P13994 396 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 IL4RP24394 825 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 ADORA2BP29275 332 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 STX2P32856 288 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 MAGEA6P43360 314 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 PSMC4P43686 418 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 IFNAR2P48551 515 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 LIG3P49916 1009 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 HDAC4P56524 1084 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 BCAR1P56945 870 aa11.68□□□□□ -0.54
LDHA-211ENST00000494573 HUNKP57058 714 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms