RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 TMPRSS6Q8IU80 811 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 FAM177A1Q8N128 213 aaPredicted RBP11.73□□□□□ -0.53
TRIM59-206ENST00000494486 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
TRIM59-206ENST00000494486 PRCCQ92733 491 aaPredicted RBP11.73□□□□□ -0.53
TRIM59-206ENST00000494486 KIFAP3Q92845 792 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 EXTL1Q92935 676 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 SKA1Q96BD8 255 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 MKRN2Q9H000 416 aaKnown RBP11.73□□□□□ -0.53
TRIM59-206ENST00000494486 SLC25A18Q9H1K4 315 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 TMLHEQ9NVH6 421 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 CFAP97Q9P2B7 532 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 RELNP78509 3460 aa11.73□□□□□ -0.53
TRIM59-206ENST00000494486 CYB561D2O14569 222 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 PPEF2O14830 753 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 VILLO15195 856 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 TRAK2O60296 914 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 USP12O75317 370 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 FAM87AP0C7U9 286 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 CD27P26842 260 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 RBMS1P29558 406 aaKnown RBP11.72□□□□□ -0.53
TRIM59-206ENST00000494486 GRIK1P39086 918 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 TSPY1Q01534 308 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 NTRK3Q16288 839 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 SEZ6Q53EL9 994 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 LAYNQ6UX15 382 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 USP53Q70EK8 1073 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 SPATA20Q8TB22 786 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 DEPDC7Q96QD5 511 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 ACE2Q9BYF1 805 aaPredicted RBP11.72□□□□□ -0.53
TRIM59-206ENST00000494486 RNF38Q9H0F5 515 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 C6orf106Q9H6K1 298 aaPredicted RBP11.72□□□□□ -0.53
TRIM59-206ENST00000494486 TRPM5Q9NZQ8 1165 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 MYLKQ15746 1914 aa11.72□□□□□ -0.53
TRIM59-206ENST00000494486 ARHGEF35A5YM69 484 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 WASH3PC4AMC7 463 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 SCAMP3O14828 347 aaKnown RBP11.71□□□□□ -0.53
TRIM59-206ENST00000494486 TRIM24O15164 1050 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 GJB6O95452 261 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 OLFM2O95897 454 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 CLTAP09496 248 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 CXCL8P10145 99 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 IFNAR1P17181 557 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 CYP2F1P24903 491 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 TNFRSF8P28908 595 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 PPP3CCP48454 512 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 GUCY2FP51841 1108 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 NOLC1Q14978 699 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRIM59-206ENST00000494486 NCAPHQ15003 741 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 SHBQ15464 509 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 NPY5RQ15761 445 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 ANO4Q32M45 955 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 PRAMEF14Q5SWL7 426 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 SPATA1Q5VX52 437 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 CDCP2Q5VXM1 449 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.53
TRIM59-206ENST00000494486 ZBTB45Q96K62 511 aaPredicted RBP11.71□□□□□ -0.53
TRIM59-206ENST00000494486 EPN3Q9H201 632 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 SPHK2Q9NRA0 654 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 DNAJC17Q9NVM6 304 aaKnown RBP11.71□□□□□ -0.53
TRIM59-206ENST00000494486 SMPD4Q9NXE4 827 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 STON1Q9Y6Q2 735 aa11.71□□□□□ -0.53
TRIM59-206ENST00000494486 OBSL1O75147 1896 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 CCDC169A6NNP5 214 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 PRRT4C9JH25 899 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 PIRO00625 290 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 NPC1O15118 1278 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 EFSO43281 561 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 TOM1L1O75674 476 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 SPATA31C1P0DKV0 1188 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 ARRB1P49407 418 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 RACK1P63244 317 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 PPP2R3AQ06190 1150 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 CLN3Q13286 438 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 C9orf57Q5W0N0 161 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 KANSL1Q7Z3B3 1105 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 TICAM1Q8IUC6 712 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 BIRC7Q96CA5 298 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 SGF29Q96ES7 293 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 SLC46A1Q96NT5 459 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 XPO6Q96QU8 1125 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 TUFT1Q9NNX1 390 aa11.7□□□□□ -0.54
TRIM59-206ENST00000494486 GEMIN8Q9NWZ8 242 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 MYO18AQ92614 2054 aaKnown RBP11.7□□□□□ -0.54
TRIM59-206ENST00000494486 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
TRIM59-206ENST00000494486 SYNCRIPO60506 623 aaKnown RBP11.69□□□□□ -0.54
TRIM59-206ENST00000494486 TSPAN3O60637 253 aa11.69□□□□□ -0.54
TRIM59-206ENST00000494486 EPHA8P29322 1005 aaPredicted RBP11.69□□□□□ -0.54
TRIM59-206ENST00000494486 CASRP41180 1078 aa11.69□□□□□ -0.54
TRIM59-206ENST00000494486 NPTX2P47972 431 aa11.69□□□□□ -0.54
TRIM59-206ENST00000494486 MYL7Q01449 175 aa11.69□□□□□ -0.54
TRIM59-206ENST00000494486 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms